Candida albicans: CAALFM_C113420CA
Help
Entry
CAALFM_C113420CA CDS
T00189
Symbol
KEM1, CaO19.4969
Name
(RefSeq) chromatin-binding exonuclease
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
cal
Candida albicans
Pathway
cal03008
Ribosome biogenesis in eukaryotes
cal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CAALFM_C113420CA (KEM1)
09123 Folding, sorting and degradation
03018 RNA degradation
CAALFM_C113420CA (KEM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C113420CA (KEM1)
03009 Ribosome biogenesis [BR:
cal03009
]
CAALFM_C113420CA (KEM1)
03016 Transfer RNA biogenesis [BR:
cal03016
]
CAALFM_C113420CA (KEM1)
03036 Chromosome and associated proteins [BR:
cal03036
]
CAALFM_C113420CA (KEM1)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CAALFM_C113420CA (KEM1)
mRNA degradation factors
5'-3' decay
5' exonucleases
CAALFM_C113420CA (KEM1)
Ribosome biogenesis [BR:
cal03009
]
Eukaryotic type
Pre-60S particles
RNases
CAALFM_C113420CA (KEM1)
Transfer RNA biogenesis [BR:
cal03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
CAALFM_C113420CA (KEM1)
Chromosome and associated proteins [BR:
cal03036
]
Eukaryotic type
Gene silencing
piRNA pathway
CAALFM_C113420CA (KEM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
XRN1_D2_D3
XRN1_D1
SH3_12
Motif
Other DBs
NCBI-GeneID:
3636222
NCBI-ProteinID:
XP_019330724
UniProt:
A0A1D8PFP3
LinkDB
All DBs
Position
1:complement(2925999..2930585)
Genome browser
AA seq
1504 aa
AA seq
DB search
MGIPKFFRFISERWPLISQLIDENQIPEFDNLYLDMNSILHTCTHSNDNTITRLSDDQMY
AAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGEE
IPKEDPFDSNSITPGTEFMANLTNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKI
MEYIRSIRSQDDYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQRKVGPKDL
HDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFILIMYVIGNDFLPNLPDLF
INKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEKHEVDVEWF
NKKLDDISISGEKKRQRIGKLLILKEQKKLVGFIKPWLMEWASQPINEILNLDQQGKLPT
LHLNKDDVEKNLEFIKEFAIEAGFLIIHSQSNDTYEAKLDIDGISPTESEEEHEERITEL
RKTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQPKLHFSIDTEEGKGDLIEMTK
HYIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDISLGLEELINEKTDLKFELSHPFKPF
EQLMAVLPARSKKLMPVVYRPLMTDEKSPIINFYPHEVDIDMNGKTASWEAVVLLDFVDE
KKLIEALKPIESKLTPEEKQRNSYGHAIKFIHNPQIDHVFSSPLPGFFHDIEHDQCYEEE
FKLPKIENLKIGFIKGAKTGKDLLAGFPTLSTIPFTSELALNEVKIFNFPSRSESMILNV
EDVWSDLTVAQFAQSFVNKLVYSKWPFLRECRVVKVVSEENKFESIKTNTGLKKVVTNEL
SVEDKKSFRSEVSNLKVTWDKFKGVKLGEINALVYVKPVNGLIRNHKGAYVKTYSKDVEV
YPLQLIVKEVTNKDQRYLTRPPLPIDQEFPIDSQVVFLGDMAYGSPAKIVGYNEDKTKLG
VKIFKIQSTAEPNIGKKRLTIEKNEIKYYPSFEVAKTLRLNPLLLSKITSQFMVQDSSKG
KVNIGLELKFESKRQKVLGYTRKSSNGKFWEFSPLAINLINTYKTKFPGLFKKLVNNVSG
SNFPTVDEISSLEELKEIRSWLKEVKSELIPVSLESESFTKFSYQAIEQYMDNYLSMNQI
PTINKDIKGVPREAILNANESYQLLSDQRFELGDRIIYVQDFGKVSILSKGTVASILTVG
SKTSLGVIFDQPLLSGNNMNGKLNSNRGLIIDSSLVLNLTNKQFVYHSHASKNRKKLTDE
EKIAKLKAIEAKKNQKQQQQQKEQQTKQKQVEQQKQKGANELLSLLKKKSDMNSTTTTST
TDGDCKKTEEKDYDKNNGNEDERVDPNAIKQIYGHIYSNVMNQGNVRPPPPPPTGPGHPQ
QFPYGMPIPPPGAPMHPGYIPVVPGNPLPPSFYQQYPPNGQQFVNSQPPPPPPPPPSQQQ
QPQVAESTSDEKSKNDNKHNVNGRGRGGSRGRGGYRGRGGVRGGRGGNKSSHQNQPKDKV
KQES
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgggtattccaaagtttttccgattcatctctgagagatggccattgatttcccaatta
attgatgaaaatcaaatccccgaatttgataatttgtatcttgatatgaattctatattg
catacttgtactcattctaatgataatacaattaccagacttctggatgatcaaatgtat
gctgccatattcaattatatcgaacatttattccaaatcattaaacctcaaaaaactttc
tatatggctattgatggggttgctcctcgagctaaaatgaatcaacaacgtgccagaaga
tttagaactgcttatgaagcagaaataaatttaaagaaagccattgaaaatggagaagaa
atacctaaagaagatccatttgattcaaattctattactccaggtacagagtttatggct
aacttgacaaataatttgaaatatttcattcataaaaaaatcactgaagattcaagttgg
gccaatattgaaatcattttgagtggtcatgaagtccccggtgaaggtgaacataaaatt
atggaatatattcgttcaataagatctcaagatgattataatccaaatttaagacattgt
atctatgggttagatgctgatttgatcatgttaggattggtcacacatgatcctcatttt
gcattattgagagaagaagtcacttttggcccacaacgtaaagttggtcctaaagattta
catgatcagaaattttatcttttacatttatcattattaagagaatatttaagtttagaa
ttccaagaaattgaaaatcaattgaattttgaatatgattttgatagaattttagatgat
tttattttaattatgtatgtcattggtaatgattttttgccaaatttacctgatttgttt
atcaataagggagcattcccattgttaattgctgctttcaaacaaacattgttagaaagt
gacggttatatcaatgaaaatgggaaaattaatttagtcagattaaacatttatatcaaa
attttatctaaatttgaatttgaaaattttgaaaaacatgaagttgatgttgaatggttt
aataaaaaattagatgatatttcaatttctggtgaaaagaaacgtcaaagaattgggaaa
ttattaattttaaaagagcaaaaaaaattagttggatttattaaaccctggcttatggaa
tgggctagtcaaccaatcaatgaaattttgaatttagatcagcaaggtaaattaccaact
ttacatttaaataaagatgatgttgagaaaaatttggagtttattaaagaatttgccatt
gaagctgggtttttaataattcattcccaatctaatgatacttatgaagccaaattagat
attgatgggatttcacctactgaaagtgaagaagaacatgaagaacgtataactgaatta
aggaaaaccattaaacaatatcaatcggctaatttaattgaaagtgaagaagttttgaat
gaaactaaagaagtgtattccgaaaaatttcaatcttggaaaaatgattattatcaacca
aaattacatttctccattgataccgaagaaggtaaaggtgacctaattgaaatgaccaaa
cattatattgaaggtttacaatgggttttgtattattattatcgtggttgtccatcatgg
aattggtattatagatatcattatgctcctagaatttctgatatttcattaggattagaa
gaattgatcaatgaaaaaactgatttaaaatttgaattatctcatccttttaaacctttt
gaacaattaatggctgttttacctgctcgatccaaaaaattgatgccagtggtttatcgt
cctttaatgaccgatgaaaaatcaccaattataaatttctatcctcatgaagttgacatt
gatatgaatggtaaaactgcttcttgggaagcagtagtattattagattttgttgatgag
aaaaaattgattgaagcattaaaacccattgaatctaaattaacccctgaggagaaacaa
agaaattcttatggtcatgctatcaaattcattcataatccacaaattgatcatgttttt
tcatcaccgttaccagggtttttccatgatattgaacatgatcaatgttatgaagaagaa
ttcaaattacctaaaattgaaaatttgaaaattggatttattaaaggagctaaaactggt
aaagatttattagctggattcccaacattatcaaccattccatttacttctgaattagca
ttgaatgaagttaaaatttttaatttcccttcaagatcagaatcaatgattttgaatgtt
gaagatgtttggtctgatttgaccgtggcacaatttgctcaaagttttgttaataaatta
gtttattccaaatggccatttttaagagaatgtcgagtggttaaagttgtaagtgaagaa
aataaatttgaatcaattaaaactaacacgggattgaaaaaagttgttactaatgagttg
agtgttgaagataaaaaatcattccgttccgaagtttctaatcttaaagttacttgggat
aaatttaagggggtcaaattaggtgaaataaatgcattagtttatgttaaaccggtaaat
ggattaattaggaatcataagggggcttatgtgaagacatattctaaagatgttgaggtc
tatcctttacaattgattgtcaaagaagttactaataaagatcaaagatatttgactaga
ccaccattaccaattgatcaagaattccctattgattctcaagttgtattcttgggagat
atggcttatggatcaccagcaaagattgttggatataatgaagataaaactaaattgggg
gtgaaaatttttaagattcaactgacagcagaaccaaacattggtaaaaagagattaact
attgagaaaaatgaaatcaaatattatccttcatttgaagttgctaaaactttaagactt
aatccattattgttatctaaaattactagtcaattcatggttcaagattcttccaaaggt
aaagtaaatattggattagaattaaaatttgaaagtaaacgtcaaaaagttttaggttat
actagaaaactgagtaatgggaaattttgggaattttctccattggctattaatttaatt
aatacttataaaacaaaattccctgggttatttaaaaaattagttaataacgttagtgga
tccaattttcctactgtggatgaaattctgagtcttgaagaattgaaagaaattagatca
tggttaaaagaagtgaaaagtgaattaatccctgtttcattagaaagtgaatcatttacc
aaatttagttatcaagccattgaacaatatatggataattatttatcaatgaatcaaatc
ccaactataaataaagatattaaaggtgttcctcgtgaagccattttgaatgctaatgaa
tcgtatcaattattaagtgatcaaaggtttgaattaggtgatagaataatttatgttcaa
gattttggtaaagtatctattttatctaaaggtactgtggcttcaattttaaccgttgga
tccaaaacttcattaggggtgattttcgatcaacctttattgagtggtaataatatgaat
gggaaattgaattctaatcgaggattaattattgattcttcattggtgttgaatttaact
aataaacaatttgtttatcattctcatgcatcaaaaaatagaaagaaattgactgatgaa
gaaaaaattgcgaaattgaaagcaatagaagctaaaaagaatcagaagcaacaacagcaa
caaaaagaacaacaaactaagcaaaagcaagttgaacaacaaaaacaaaaaggtgctaat
gaattgttgtctttgttgaagaaaaaactggatatgaatagtactaccactacttccact
actgatggagattgtaagaaaacagaagaaaaagattatgacaaaaataatggtaatgaa
gatgaaagagttgatcctaatgcaattaaacaaatttatggccatatttattctaatgtt
atgaatcaaggtaatgttcgtcctccaccaccgccaccaacaggtccaggtcatccacaa
caatttccttatggtatgcctattcctccaccaggtgcaccaatgcatcctggttatatt
cctgtagttccaggaaatccattacctcctagtttctaccaacaatatccaccaaatgga
caacagtttgtcaattcacaaccaccgccaccaccaccaccaccgccatcacaacaacaa
caacctcaagtagctgagtcaacctctgacgagaaatcaaaaaatgataacaagcacaat
gtaaatggtagaggaagaggtggttctagaggaagaggcggatatagaggaagaggcgga
gttagaggtgggcgaggtggaaataaatcatctcatcaaaatcaacctaaagataaggta
aaacaagaatcataa
DBGET
integrated database retrieval system
