KEGG   Candida albicans: CAALFM_C114410WA
Entry
CAALFM_C114410WA  CDS       T00189                                 
Symbol
CaO19.7256
Name
(RefSeq) RNA-binding protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
cal  Candida albicans
Pathway
cal03018  RNA degradation
cal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CAALFM_C114410WA (CaO19.7256)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAALFM_C114410WA (CaO19.7256)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C114410WA (CaO19.7256)
   03041 Spliceosome [BR:cal03041]
    CAALFM_C114410WA (CaO19.7256)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CAALFM_C114410WA (CaO19.7256)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CAALFM_C114410WA (CaO19.7256)
Spliceosome [BR:cal03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CAALFM_C114410WA (CaO19.7256)
SSDB
Motif
Pfam: LSM KOW7_SPT5 RimP_C BPL_C DUF6897 LSM12_LSM
Other DBs
NCBI-GeneID: 3643293
NCBI-ProteinID: XP_715054
UniProt: A0A1D8PFX4
LinkDB
Position
1
AA seq 77 aa
MSDETVPQTVLPLEVIDRSVGKRVRVLMTGDKEFNGKLIGFDDYVNMVLEDVTEVDGGAP
IKKMLLNGGHIAMIVPE
NT seq 234 nt   +upstreamnt  +downstreamnt
atgtcagacgaaacagtcccacaaacggtgttgcctttggaagtaatagataggtcagtt
ggtaagagggtccgggtgttgatgactggagataaagagtttaatggaaagttgattggt
tttgatgattatgtgaatatggttttagaggatgtcactgaagtcgatggaggtgctcca
attaagaagatgctattaaatggtggccacattgccatgatcgttcctgagtaa

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