Candida albicans: CAALFM_C201130WA
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Entry
CAALFM_C201130WA CDS
T00189
Symbol
NOT3, CaO19.2012
Name
(RefSeq) CCR4-NOT core subunit
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cal
Candida albicans
Pathway
cal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAALFM_C201130WA (NOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C201130WA (NOT3)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CAALFM_C201130WA (NOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CAALFM_C201130WA (NOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
GBP
Motif
Other DBs
NCBI-GeneID:
3638829
NCBI-ProteinID:
XP_019330745
UniProt:
Q5AD56
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Position
2:183377..185773
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AA seq
752 aa
AA seq
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MSNRKLQKEIDIIFKKIQEGLQDFDYHYERYESIQNTEDDSDNQREKEKLANDLKKEIKK
LQKFREQIKHWLQNDTVHTLGPVGTSYESKLAENKSLIEDSMETYKLVEKQSKLKTFSNQ
SIMMTFMDSTNGDDDDDDDDSDDDELFSGSDEDEEDEYSDLPEDAVNAIHFFKDSILQLR
EQTHKLDHEYEKLAAKKLRKNNLATIEAKKEKIQSTIGNNKFHQKKLKKLLRQLTSGVVT
EFNLIWLLKDDLNKYLESNGDYEFTRETELYDDIFNQIAAVEEDYSEIHEDNHDHSHSHL
EKTSTANGTHHESATTTATAAKNSSVTTRTSPSPILTKANGHIKELSVESGSPTTSRSKL
SKIHTNTSQSSTHSNTSSSTHAQAPRQSPELTSPAIVKTLRPATAPSKPVGTLKWSAAAA
AAIPDVQEKPELVETESNGSSVHKTVSKDQYEEKINYQSPAPTQQQQQPQTSVESKTLST
TQSLASSITDNINLDKYKEVIKNSNLTKTELGLFSDMNLARVPPGIQDLVISFASKRNND
NFKVLVDSTEFNQFALPLHKPYLPEIVQPSYYSQYTSTSFKHPTPLVKFQSYWNQVRANF
GFQKLMDEIKSLTLQNNADNLPIIAELTFVLFYGFYYGVTPAENLIAESYLFELGWKPYK
NQSEDGSNNLSTGSISLSDINGSKSKSNRSSNYYFWFKRVKLISRGEDMGQPSNIEFGDY
QVFDLSFWEIFVKYGFKFDYNFCQMEPSKTLF
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgaaaactacaaaaggaaattgacattattttcaagaaaatccaagaaggc
ttacaagactttgactaccattatgaacgatacgaaagtatacaaaacactgaagatgat
tctgataatcaaagagaaaaagagaaattggccaatgatctaaaaaaagaaatcaaaaaa
ttacaaaaatttcgagaacaaatcaaacattggctacagaatgatactgtgcatactcta
ggacccgttggaacatcgtatgaatctaaactagctgaaaataagagtctaattgaggat
tccatggaaacgtataaactagtagaaaagcaaagtaaattgaaaacattttccaaccag
tccatcatgatgacatttatggatagcacgaatggcgatgacgatgatgatgacgacgat
tcagatgatgatgagttgttcagtggtagtgatgaagatgaggaagacgaatacagtgat
ttgccagaagatgcggtgaacgccattcatttcttcaaagattctatactacagttgaga
gaacaaacacacaagttggatcatgaatacgaaaagttggcagccaagaagttacgtaaa
aacaatttggcgaccatagaggccaagaaggaaaagattcagctgacgatagggaacaat
aaatttcatcagaaaaagctcaagaaattactcagacagttgacaagtggtgtagttaca
gaatttaatttaatatggttgttgaaagacgatttgaataaatatttggaatctaatgga
gactatgagtttactagagaaaccgaattatacgatgacattttcaatcaaattgcagca
gtcgaagaagattattctgaaattcacgaagacaaccatgaccattcgcattcccacctt
gaaaaaacttcaacggcgaatggaacacaccatgaaagtgcgaccaccacagctactgct
gctaaaaactcttctgtaacaacacgaacatcgccgtctccaattttaacgaaagcaaat
ggccatatcaaagaattatccgttgaatcaggatctcctacgacttcacgtctgaaactt
ctgaaaatccataccaatacactgcaactgagtacacattcaaacacttcctcatcaacg
cacgcacaggctcctcgacaaagccccgaattaacttcaccggcaattgtaaagactttg
agaccggcaactgctccttctaagccagttggtactctcaaatggtctgcggcggcggca
gcagcaattcccgatgttcaagaaaaaccagaattagtagaaacagaatccaatggatct
agtgtacacaaaacagtatctaaggatcaatatgaggaaaaaataaattaccaatcacca
gcaccaacacaacaacaacaacaaccgcaaacactggtagaactgaagactctttctacc
acccaaagtttggcttcttcaatcaccgacaatataaatcttgataaatataaggaagtg
atcaagaattcgaatttaactaaaaccgagttggggttgttttccgacatgaacttggcc
agagttccaccaggtattcaagatctagtgatatcgtttgcatcaaaaagaaataacgat
aactttaaagttttagtcgattcaactgaattcaatcaatttgctttaccattacacaaa
ccatatttacctgagattgttcagccatcatattattcgcaatataccagtaccagtttt
aagcatccaactccattagtcaaatttcaaagctattggaatcaagtaagagcaaacttt
ggatttcagaaattaatggacgagataaaatcattgactttgcaaaataatgctgataat
ttgccaattattgctgagttaacatttgtattattttatggattttattatggtgttact
ccagctgaaaacttgattgctgaatcgtatttatttgaattgggttggaaaccttacaag
aaccaatcagaagatggtagtaataatttatcaactggttcaattagtttatcagatatt
aatggactgaaatccaagtctaatagatctagtaattattatttttggttcaaacgagta
aaattaatttctcgtggtgaagatatgggacaaccatctaatattgaatttggtgattac
caagtgtttgatttgagtttttgggaaatatttgtcaaatatggtttcaaatttgattat
aatttttgtcaaatggaaccatcaaaaacattattttga
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