Candida albicans: CAALFM_C300660WA
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Entry
CAALFM_C300660WA CDS
T00189
Symbol
CaO19.5391
Name
(RefSeq) U2 snRNP complex subunit
KO
K12830
splicing factor 3B subunit 3
Organism
cal
Candida albicans
Pathway
cal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CAALFM_C300660WA (CaO19.5391)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cal03021
]
CAALFM_C300660WA (CaO19.5391)
03041 Spliceosome [BR:
cal03041
]
CAALFM_C300660WA (CaO19.5391)
03036 Chromosome and associated proteins [BR:
cal03036
]
CAALFM_C300660WA (CaO19.5391)
Transcription machinery [BR:
cal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CAALFM_C300660WA (CaO19.5391)
Spliceosome [BR:
cal03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CAALFM_C300660WA (CaO19.5391)
Complex B
CAALFM_C300660WA (CaO19.5391)
Complex C
U2 SnRNP specific factors
CAALFM_C300660WA (CaO19.5391)
Chromosome and associated proteins [BR:
cal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
CAALFM_C300660WA (CaO19.5391)
TFTC complex
CAALFM_C300660WA (CaO19.5391)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
3640538
NCBI-ProteinID:
XP_717766
UniProt:
Q5A7S5
LinkDB
All DBs
Position
3:109086..112745
Genome browser
AA seq
1219 aa
AA seq
DB search
MMMRDGNISGPKKKKFTTKCRPFSFYKNRHIIMLINDESVYLYNLTLKPPSYYISSIVGQ
FYKQDNSTKNAQQLVLVSSTTLQLFEINEEAGKLELQSSQNLLGIINSIEKICLSEVDGV
VITSDSGNLSILQYDNKTKKFISKIQEPMTKNGWGRNYVGENLAIDPENRCILVAAMEKN
KLFYKIESNSSGSKELSSPLEAHSKQVLCLKIVALNTDHNNPLFGALELTPEKKCIINYY
ELDQGLNHVVKKKPNSSNSDPLPNDVNYLIPLPGHIGGMVVCGTNWCFYDKLDGPRIYLP
LPRRNGQTQDSIIVNHVTHVLKKKKFFILLQNALGDLFKLTVDYDFDKEIIKNISITYFD
TIPPALSLNIFKNGFLFANVLNNDKLLYQFEKLGDDLTEGELVINSSDYESLNSVRESVT
SFKLKGLDNLALIDVLETLSPITDSKIIDSKLVTLSSHSYVKSITHGVPTTTLVESPLPI
TPTDIFTTKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVG
IASVVQIYSNGIKHVRTVNGNKKTTDWFPPAGITITHATTNNQQVLIALSNLSVVYFEID
ATDDQLIEYQDRLEIATTITAMAIQENISEKSPFAIIGCSDETIQVVSLQEHNCLEIKSL
QALSANSSSLKMLKSSGKETHVHIGMENGVYARIKIDTINGNLSNSRVKYIGSKPVSLSV
IKFSNEIEGILAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIVGIKDNN
LIIFSVGKEDSVFDPSQDLTIATTKLRYTPRKMITNGNRLFISESEYNVQGPFKCNINGD
VKENVDEDYYEAFGYEWKQNSWASCIQVVDSKSNQVIQSLQLDGNESIVSMSAVSFNKTS
TPSVPASHLVVGVCTNQTILPNSYDKSYLYTFKIGKKHLQLVHKTELDHIPQVLENFQDK
LLVASGNHIRLYDIGQKQLLKKSTTIIDFSTNINKIIPQTNRIIICDSHKSSIVFAKFDE
SQNQFVPFADDVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQADDDWTILKTQ
DGILNSCPYKLQNLIEFHIGDIITSFNLGCLNLAGTESVIYTGLQGTIGLLIPLVSKSEV
ELLFNLQLYMQQSQNNLVGKDHLKLRSYYNPIKNVIDGDLLERFLEFDISLKIEISRKLN
KSVNDIEKKLIDLRNRSAF
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgagagatggaaatatctcgggaccaaaaaaaaaaaaatttaccaccaagtgt
agaccattttctttctacaaaaacagacatattataatgttgataaatgatgaatcagta
tacttgtataatttaactttgaagccgccttcatattatatatcctcgatagtggggcag
ttttacaaacaagacaattccaccaagaatgcgcaacaattagttcttgtctcatctact
acattacaattattcgaaataaatgaagaagcagggaaacttgaacttcaatcttctcaa
aacctacttggaataatcaatagcattgaaaagatttgtctttctgaagttgacggggta
gtcattaccagtgattcaggaaatctctcaattttacaatatgacaataaaactaaaaaa
tttatctcaaagattcaagagccaatgacaaaaaatggatgggggagaaattatgttggt
gaaaatttggccattgaccctgagaatcgatgtatattagtagcagcaatggagaagaat
aagctattttataaaatagaatcaaattctctgggaagcaaggagttaagttcaccttta
gaggcacattctaagcaagtattatgtttgaaaatagttgcgttgaatacagatcataac
aatccattatttggagctcttgaattgactccagagaaaaagtgtattataaattattat
gaattagatcaaggtttgaaccatgttgttaaaaagaaacccaattcgtcaaatctggat
ccattacccaatgatgttaactatttgatcccgttacctggtcatattggaggtatggtt
gtttgtgggaccaattggtgtttctatgataaattagatggtcctagaatatatttacct
ttgccaagacgaaacggacaaacacaagattccattattgttaaccacgttacccatgtt
ttgaagaagaaaaaattttttatattactacaaaacgcattaggtgatttgtttaaatta
actgttgattatgattttgataaagaaattattaagaatatatcaattacttattttgat
actatcccaccggcactcagtctaaatattttcaagaatggatttttatttgccaatgta
ttaaataatgataaattgttgtatcaatttgaaaaattgggtgatgatttaacagaaggt
gaattggtcatcaattcttcggattatgaaagtttgaacagtgtccgggaatccgtcacc
tcatttaagttgaaaggattggataatttggcattgattgacgttttggaaacattgagt
cctataactgattctaaaattatagattccaaattagtcactttatcttctcattcatat
gtcaaatcgataactcatggtgttccaacaactacattagttgagtccccattgcctata
acgccaacagatattttcacaaccaaattatcactagagtcggccaatgatgaatattta
gtgatatcgtcatcgttgtcttccaaaacattggtgctttctattggagaagttgttgaa
gacgttgaggattctgaatttgtgttagaccaacctactatagcagtacaacaagtagga
attgcatcagtagtacaaatttattctaatggtattaagcatgtgaggacggtaaatggg
aataaaaaaactactgattggttcccgccagcaggaataacaattactcatgccactact
aataatcaacaagttttaattgccttatccaatttaagtgtggtgtattttgaaattgat
gcaactgatgatcaattgattgaatatcaagatcgattagaaattgcaaccacgataaca
gcaatggcaattcaagaaaacattagtgaaaaaagtccatttgcaattattggctgttct
gatgaaacaattcaagtggtctcgttacaggaacacaattgtcttgaaatcaaatcttta
caagcattatcggcgaatagttctagtttgaagatgttaaaactgtcgggtaaagagaca
catgtacatattggtatggagaatggtgtttatgcaagaatcaaaatagatactataaat
gggaatctctcgaatagcagagttaaatatattggttccaaaccggtaagtttaagtgtt
attaaattttctaatgaaatagaaggaatattagctatttcttcagcaccttggatatct
tatttataccgagattctttcaagataacaccattgttggaaattgacattactaatgga
tcttcattcatatctgaagatattggtggtgaaggaatagttggaataaaagataacaac
ttgataatattttctgtgggtaaagaagatagtgtatttgaccctctgcaagatttgaca
attgccaccacaaaattgagatatactcctagaaaaatgattactaatggaaatcgtttg
tttatatcggaactggaatataatgtgcaaggaccatttaaatgcaatataaatggagac
gtaaaggagaatgtcgatgaagattactatgaagcatttggttatgaatggaagcaaaat
agttgggcttcatgtattcaagttgtcgatagcaaatcaaatcaagttattcaaagcttg
caattggacggaaatgaaagtattgtttctatgagtgctgtatcatttaataaaacgtca
acaccttcagtgcctgcttcacatcttgttgttggtgtgtgtaccaatcaaactatttta
cctaattcttatgataaaagttatttatatacttttaaaattggtaagaaacatttacaa
ttagttcataaaactgaattggatcatataccacaagtattggagaatttccaagacaaa
ttattagttgcatctggtaatcacatacgattatatgatattggacaaaaacaattattg
aagaaatcaactaccataattgatttttcaacaaatattaataaaatcatacctcaaaca
aatcgaattattatttgtgattctcataagagttctattgtatttgccaaatttgatgaa
tctcaaaatcaatttgttccatttgctgatgatgtaatgaaacgacaaatcacttcgatt
atgaatttggatattgatacattaattggtggtgataaatttgggaatatatttgttact
cgaatagatgaagatatttcaaaacaagccgatgatgattggacaatattgaaaactcaa
gatgggattttgaatagttgtccatataaactacaaaatttgattgaatttcatattgga
gatatcataacttcattcaatttgggttgtttgaatttggctggtactgaaagtgtcata
tatactggattacaagggacaattggattattgatcccgttggtttcgaaaagtgaagtt
gaattgttatttaatttgcaactctatatgcaacaatcacaaaataatcttgttggtaaa
gatcatttgaaattaagaagttattacaatccaattaaaaatgtgattgatggggattta
ttagaacgatttttggaatttgatatatcattgaaaattgaaatttctagaaaattgaac
aaaagtgttaatgatattgagaaaaaattgattgatttaagaaatagatctgcattttag
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integrated database retrieval system
