Candida albicans: CAALFM_C303260WA
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Entry
CAALFM_C303260WA CDS
T00189
Symbol
CaO19.325
Name
(RefSeq) cleavage polyadenylation factor subunit
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
cal
Candida albicans
Pathway
cal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CAALFM_C303260WA (CaO19.325)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C303260WA (CaO19.325)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CAALFM_C303260WA (CaO19.325)
U7-dependent histone pre-mRNA processing factors
CAALFM_C303260WA (CaO19.325)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
PAPS_reduct
Motif
Other DBs
NCBI-GeneID:
3638320
NCBI-ProteinID:
XP_720020
UniProt:
A0A1D8PJN1
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All DBs
Position
3:689950..692745
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AA seq
931 aa
AA seq
DB search
MFGFSLLTPGDNDHSFKAALLEFDNEFKLIADPSWNGVDVNAAMFMEEHLKETNAILLSH
STAEFISGFILLCIKFPILMSSIPVYSTLPVNQLGRVSTVEYYRAMGFLGPVDSAILELD
EVDNWFDKVNLLKYQQSLNLFDNKVVVTPYNAGHSLGGTFWLITKRIDRVIYAPAWNHSK
DSFLNSASFISPSTGNPHLSLLRPTAFITATDMGSVMSHRKRTEKFLQLVDATLANGGAA
VLPTSLSGRFLELFHLIDEHLKGAPIPVYFLSYSGTKILTYASNLLDWMSKSFTKEWEEL
SSVPFNPSKVDLLLDPSELLKLSGPKIVFCSGIDLRSGDISAEAFQYLCNDEHTTIILTE
KTTMNFASSLSSVLYTEWDSLAKKRGGGESEDGIAVPIDKNISLKNWTKEVELTGTELTE
FQEKVAQKRKEKLLAKVRDQKNQNILSADTVDSEDSSDDDDEGDNEAEKQKGNTSSNLLI
KQYQNINVADSNVAPNEVNPLATHEAFITDHIKQSLEKNLPIDLKITHKLRPRQATFPYF
ATAHKQKFDDYGEVIKIEDYQRHDEVSHSKIIMEGKRKFDEKRTANNRRNKNQNKQQANK
LTPQEQVNRKLLQKYLDTLSNPKKRVSLNYGTKKKSETQKLKVRCGLSFVDLSGLVDLRS
LGIIVQALKPYNLILLPDYTPSQNLTRVQEFFANQQNEQLQEQTKKNLAQSSRYLSLVSI
RDGLSSAMSPYSSGNMNVMVVHDNESVKIGAESESGSIGINNFEVNLDDSIVKDLKWQKI
GDDYKVAKLYGELELQNQFPAAKKTRTLQDYINSNTHFSLRKLDGTTAVKRQETIANQVQ
DPKIRALITNGPKLAIGNIRLPDLKKKLQNLNMTAEFKSEGTLVVNDILAVRKIAYGLVE
SDESGDIVIDGNVGPLYYKVKECIREMLAYV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggttttctcttttgactccaggagataatgatcattcttttaaagctgcctta
ttagaatttgataatgaattcaagttgattgcagatccatcttggaatggtgtcgatgta
aatgcagccatgttcatggaagagcacttaaaagaaaccaatgcaatcctattatcacat
tcaacagcagaatttatcagtgggtttatactattgtgtataaagttcccaattttgatg
tccagtatacctgtttattcgacattacccgtcaaccagttggggagagtttctacagtg
gaatattatcgtgctatgggatttttgggtcctgtggactcggctatacttgagttagat
gaagtggacaactggtttgataaagtcaatttattaaagtatcaacaatcattgaattta
tttgacaataaggtggtggtcacgccctataatgcagggcattcattgggaggcacattt
tggttaatcacgaaaagaatagatcgggtaatttatgcaccagcttggaatcattcaaag
gactcttttctaaacagtgcttcctttatctcgccatcaactggtaacccacatttactg
ctattgaggccaacagctttcatcactgctacagatatgggatcggtgatgtcacatagg
aaaagaaccgagaaatttttgcaattggtggatgccacattagctaatggtggtgctgca
gtattaccaacatctttatcaggaaggtttttagaattgtttcatttgatcgatgaacat
ttaaagggtgcaccaataccggtgtatttcctttcttattctggaactaaaatattaacg
tatgcgtctaatctattggattggatgtccaaaagcttcactaaagaatgggaagaatta
tccagtgtccctttcaacccttcaaaagttgatttgttgctagatccaagtgaattgtta
aaactaagtggtcccaaaattgtgttttgctctggtatagatttgcgaagtggtgatata
tctgccgaggccttccaatatttatgtaacgatgaacacacgacaattattttgacagaa
aagacgacgatgaactttgctagtagtttgagctcagtactctacactgaatgggactcg
ttagctaaaaaaagaggaggcggagagtctgaagacggtattgctgtgcccatagataaa
aatatttcgttgaaaaattggacaaaggaagtagagttaacaggtacagagttgacagag
tttcaagaaaaggtggctcagaaaagaaaagaaaaattattagccaaagtgagagatcaa
aagaatcagaatattttaagtgccgataccgtagattcagaagactcttctgatgacgat
gacgagggagacaatgaagcagaaaagcaaaaaggcaatacttctagtaacttgctaatc
aaacaataccagaatatcaatgtcgcagattctaatgttgctcctaacgaagtcaaccct
cttgctactcatgaagcattcatcacagatcatattaaacaaagcttggaaaagaactta
cccatcgatttgaagataactcacaagttgagacctagacaagcgacgttcccatacttt
gccactgcgcacaagcaaaaatttgatgattatggagaagtgatcaagattgaagattac
caaagacatgatgaagtctcacacagtaaaattataatggaaggcaagcgaaaattcgat
gaaaaaagaaccgccaacaatagaagaaacaagaatcaaaacaaacaacaggcaaacaaa
ttgacgccacaggaacaagttaatcgaaaattgcttcagaaatacctagacacattgtct
aatcctaagaaaagagtcagcttaaattatggaacaaagaagaagagtgaaacacaaaag
ttgaaagttagatgcggattgtcatttgtggatttatcaggacttgtagatttacgttca
ttggggattattgtacaagcattgaaaccttacaatttgatattattacctgattataca
ccactgcagaacttgactcgtgtacaagagttttttgccaatcaacaaaatgagcaattg
caggagcaaacaaaaaagaatttagctcagtcgtcgaggtatttatctcttgtatcgata
agagatggtctttccagtgccatgtcgccttattcaagtggtaacatgaatgttatggtt
gttcatgacaatgaatcagttaaaataggagccgaatcagagtcaggaagtattggcatc
aataactttgaagtgaatttggatgattctattgtcaaagatttgaaatggcaaaagatt
ggtgatgactacaaagttgctaaattgtatggagaattagaacttcagaatcaatttcca
gctgctaaaaagacaagaactttgcaggattacattaattcaaacacccatttctcatta
agaaagttagatggaaccaccgctgtgaaaagacaggaaacaatagccaaccaagtacaa
gatccaaaaatacgagcattgataacaaacgggcccaagttggctatagggaacattcga
ttgccagacttgaaaaagaaattacaaaacttgaatatgacagctgaattcaaaagtgag
ggtacattggtggtaaatgacattttagcagtcagaaagatcgcctatggattagttgaa
agcgatgaatctggtgatatagtaatagatggtaatgttggtccattgtattataaagtc
aaagaatgcataagggaaatgctagcatatgtatag
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