KEGG   Candida albicans: CAALFM_C304590WA
Entry
CAALFM_C304590WA  CDS       T00189                                 
Name
(RefSeq) RNA-binding protein
  KO
K12881  THO complex subunit 4
Organism
cal  Candida albicans
Pathway
cal03013  Nucleocytoplasmic transport
cal03015  mRNA surveillance pathway
cal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CAALFM_C304590WA
  09122 Translation
   03013 Nucleocytoplasmic transport
    CAALFM_C304590WA
   03015 mRNA surveillance pathway
    CAALFM_C304590WA
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C304590WA
   03041 Spliceosome [BR:cal03041]
    CAALFM_C304590WA
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CAALFM_C304590WA
    TREX complex
     CAALFM_C304590WA
Spliceosome [BR:cal03041]
 Complex C
  Other components
   EJC/TREX
    CAALFM_C304590WA
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CAALFM_C304590WA
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 RRM_PARP14_3 Na_H_antiport_2 RRM_7
Other DBs
NCBI-GeneID: 30515204
NCBI-ProteinID: XP_019330866
UniProt: A0A1D8PK11
LinkDB
Position
3:973774..975360
AA seq 227 aa
MSASLDKSLDDIISSNKKTFKSKRPGAKFGAKGGNRVGKKIGGTNNNKKPIAKFNKPAAA
VAAAVPAIDLSYATKVNVSGLPKDLKHDNIKEFFQSQIGGVQTVALSYNEKGQFKGFATI
VFKSSKFATAAVDKYNGASIDGGAAKLRLELIIDTSKKPLAARIAPNAKAAAAAKTAGGK
KIAAAKNALNKKKAGPGNKNNNKQKKPKQKKKTIEELDQEMADYFEN
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtctgcctcattagataaatcattagatgacattatttcatcaaacaagaaaactttt
aaatccaaaagaccaggtgctaaatttggcgctaaaggtggcaaccgtgttggtaagaaa
attggtggtactaataataacaaaaaaccaatagccaaattcaacaaacctgctgctgct
gttgctgctgccgttcctgctattgatttgagttacgctactaaagttaatgtttctggt
ttaccaaaggacttgaaacacgataacattaaggaattttttcaatcacaaattggtggt
gtgcaaactgtggccttgagttataatgaaaaaggtcaattcaaaggttttgctactatt
gttttcaaatccagtaaatttgcaactgctgcagttgataaatacaatggtgcttccatt
gatggaggtgctgccaaattaagattagaattaattattgatactagtaagaaaccattg
gctgccagaattgctccaaatgcaaaggctgctgccgctgctaaaaccgctggtggtaag
aagattgctgctgctaaaaatgctcttaataaaaagaaggctggtcctggcaacaaaaac
aacaataagcaaaagaaaccaaaacaaaagaagaagactattgaagaattagaccaagaa
atggctgattatttcgaaaattag

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