Candida albicans: CAALFM_C304590WA
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Entry
CAALFM_C304590WA CDS
T00189
Name
(RefSeq) RNA-binding protein
KO
K12881
THO complex subunit 4
Organism
cal
Candida albicans
Pathway
cal03013
Nucleocytoplasmic transport
cal03015
mRNA surveillance pathway
cal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CAALFM_C304590WA
09122 Translation
03013 Nucleocytoplasmic transport
CAALFM_C304590WA
03015 mRNA surveillance pathway
CAALFM_C304590WA
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C304590WA
03041 Spliceosome [BR:
cal03041
]
CAALFM_C304590WA
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CAALFM_C304590WA
TREX complex
CAALFM_C304590WA
Spliceosome [BR:
cal03041
]
Complex C
Other components
EJC/TREX
CAALFM_C304590WA
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CAALFM_C304590WA
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
RRM_PARP14_3
Na_H_antiport_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
30515204
NCBI-ProteinID:
XP_019330866
UniProt:
A0A1D8PK11
LinkDB
All DBs
Position
3:973774..975360
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AA seq
227 aa
AA seq
DB search
MSASLDKSLDDIISSNKKTFKSKRPGAKFGAKGGNRVGKKIGGTNNNKKPIAKFNKPAAA
VAAAVPAIDLSYATKVNVSGLPKDLKHDNIKEFFQSQIGGVQTVALSYNEKGQFKGFATI
VFKSSKFATAAVDKYNGASIDGGAAKLRLELIIDTSKKPLAARIAPNAKAAAAAKTAGGK
KIAAAKNALNKKKAGPGNKNNNKQKKPKQKKKTIEELDQEMADYFEN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcattagataaatcattagatgacattatttcatcaaacaagaaaactttt
aaatccaaaagaccaggtgctaaatttggcgctaaaggtggcaaccgtgttggtaagaaa
attggtggtactaataataacaaaaaaccaatagccaaattcaacaaacctgctgctgct
gttgctgctgccgttcctgctattgatttgagttacgctactaaagttaatgtttctggt
ttaccaaaggacttgaaacacgataacattaaggaattttttcaatcacaaattggtggt
gtgcaaactgtggccttgagttataatgaaaaaggtcaattcaaaggttttgctactatt
gttttcaaatccagtaaatttgcaactgctgcagttgataaatacaatggtgcttccatt
gatggaggtgctgccaaattaagattagaattaattattgatactagtaagaaaccattg
gctgccagaattgctccaaatgcaaaggctgctgccgctgctaaaaccgctggtggtaag
aagattgctgctgctaaaaatgctcttaataaaaagaaggctggtcctggcaacaaaaac
aacaataagcaaaagaaaccaaaacaaaagaagaagactattgaagaattagaccaagaa
atggctgattatttcgaaaattag
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