Candida albicans: CAALFM_C306100CA
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Entry
CAALFM_C306100CA CDS
T00189
Symbol
DED1, CaO19.7392
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cal
Candida albicans
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C306100CA (DED1)
03041 Spliceosome [BR:
cal03041
]
CAALFM_C306100CA (DED1)
03036 Chromosome and associated proteins [BR:
cal03036
]
CAALFM_C306100CA (DED1)
Enzymes [BR:
cal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CAALFM_C306100CA (DED1)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CAALFM_C306100CA (DED1)
mRNA cycle factors
Common to processing body (P body) and stress granule
CAALFM_C306100CA (DED1)
Spliceosome [BR:
cal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CAALFM_C306100CA (DED1)
Chromosome and associated proteins [BR:
cal03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CAALFM_C306100CA (DED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7090
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
3641752
NCBI-ProteinID:
XP_716633
UniProt:
Q5A4E2
LinkDB
All DBs
Position
3:complement(1387874..1389892)
Genome browser
AA seq
672 aa
AA seq
DB search
MSDISKQMNNLSVNDGANTVNNNNSFRGGRSQYVPPHLRNRQGGGNQSGSSSESSDVPFG
GSQRGGFNSNGFNNNRGGFNNGGYNNNRGGFNNGGFNNRGNYNQSFGGRGGRGGFNNGGG
RYQRPTPGVGKWQDGKHEPAPRNEKLEVELFGTADDSHFQSSGINFDNYDDIPVEASGDK
VPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGF
LFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFSYRSWVRA
CVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGF
EPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQ
KILYVEDDEKKSVILDLLSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQY
EREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNV
GIATAFFNRNNKNVVKGLIELLSEANQEVPDFLTKIAREGAFGKMTRGGGRGGSSRGPSR
DFRRSGNSGWGNSGNSGWGNSGNASSSGWGGNSSSSYSNTNSNYGGGYNNNQRSNFSSGG
SYGNQTGSNSWW
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatattagtaaacaaatgaataatttgagtgttaacgatggtgctaacacagta
aacaacaacaacagctttagaggcggccgttcccaatacgtgccacctcatttaagaaac
agacaaggtggtggtaatcaatcaggttcctcatcagaatcatcagatgttccatttgga
ggatctcaacgtggtggatttaactcaaatggattcaacaacaacagaggtggattcaac
aatggtggctacaacaacaaccgaggtggattcaacaacggtggcttcaataacagaggt
aactacaaccaatcctttggaggcagaggtggcagaggtggtttcaacaacggtggcggt
agataccaaagaccaactccaggtgtcggtaaatggcaagatggtaaacacgaaccagct
cctcgtaatgagaaattagaagtggaattatttggtactgctgatgattctcatttccaa
tcttctggtattaactttgacaattatgatgatattccagttgaagctagtggtgacaaa
gttccagaacctattacttcctttactgctccaccattggacgaattgttggttgaaaac
attcagttgtctagattcaccaaaccaaccccagtccaaaaatactccgttccaattgtt
gctgctggtagagatttgatggcttgtgcccaaactggttccggtaagaccggtgggttc
cttttcccagttttatctgaatcttacatgaagggaccagctccagttcctgaatcaaat
ggtgccttctcttcacacaaagtttatccaaccatacttgttatggcaccaaccagagaa
ttggtttctcaaatttacgaagaaagtaaaaaattcagttacagatcatgggttcgtgct
tgtgtcgtttatggtggtgccgatattggtcaacaaatgagaaacatggacagaggttgt
gatttgttagttgccaccccaggtcgtcttaaggatttgttggatagaggcaaagtttct
ttggccaacattagatacttggttttggatgaagctgatagaatgttggatatgggtttt
gaaccacaaatcagatacattgttgaagagtgtgatatgcctgctgtcaaggatagacaa
acattgatgttttctgctactttcccaagagacattcaaatgttggcccgtgatttctta
aaagattatgttttcctttctgttggtagagttggttctacttcagaaaacatcacccaa
aagatcttgtacgttgaagatgacgaaaagaagtcagttattttggacttgttatctgcc
aatgaaaatggattaactatcgttttcactgaaaccaagagaatggccgacaacttggcc
gattacttgtacgaccaaggattcccagctactgctattcatggtgacagatctcaatat
gaaagagaaaaagctcttgctgccttcaaaaatggtgctgctcctattttggttgccact
gccgttgctgccagaggtttggatattcctaatgtttcccacgttatcaactacgattta
cctagtgatatcgatgactatgttcatagaattggtcgtactggtcgtgccggtaacgtt
ggtattgccactgcttttttcaacagaaacaacaagaatgttgttaaaggattaattgaa
ttattatctgaagccaatcaagaagtcccagactttttaactaaaattgccagagaagga
gcttttggtaagatgactcgtggtggtggccgtggcggttccagccgtggaccatccaga
gatttcagaagaagtggaaattcaggatggggcaactctggtaacagtggctggggtaac
tccggtaacgccagtagcagtggctggggtggtaattcatcctcatcatactccaacact
aacagcaattatggtggtggttacaacaataaccaacgttctaactttagcagcggtggc
agttacggtaatcaaactggttccaactcctggtggtaa
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