KEGG   Candida albicans: CAALFM_C400220CA
Entry
CAALFM_C400220CA  CDS       T00189                                 
Symbol
SUB2, CaO19.5647
Name
(RefSeq) ATP-dependent RNA helicase
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
cal  Candida albicans
Pathway
cal03013  Nucleocytoplasmic transport
cal03015  mRNA surveillance pathway
cal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CAALFM_C400220CA (SUB2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    CAALFM_C400220CA (SUB2)
   03015 mRNA surveillance pathway
    CAALFM_C400220CA (SUB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C400220CA (SUB2)
   03041 Spliceosome [BR:cal03041]
    CAALFM_C400220CA (SUB2)
Enzymes [BR:cal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CAALFM_C400220CA (SUB2)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CAALFM_C400220CA (SUB2)
Spliceosome [BR:cal03041]
 Complex C
  Other components
   EJC/TREX
    CAALFM_C400220CA (SUB2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CAALFM_C400220CA (SUB2)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 CMS1
Other DBs
NCBI-GeneID: 3645033
NCBI-ProteinID: XP_019330896
UniProt: A0A1D8PKZ3
LinkDB
Position
4:complement(<33383..>34763)
AA seq 433 aa
MSHEGQEELLDYSDSEEIAVSTTTQASGEAQSNDKESDKKGSYVGIHATGFRDFLLKPEL
LRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEIST
LVICHTRELAYQIRNEYARFSKYMPDVKTDVFYGGTPIKRDIEKLKNKDTCPHIVVATPG
RLHALVEEKAIRLNNVKSFVIDECDKVLESIDMRRDVQDIFRATPHQKQVMMFSATLSQD
IRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVIIFV
KSTRRANELNKLLCACNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIE
RINLAINYDLPNEADQYLHRVGRAGRFGTKGLAVSFVSSKEDEEVLEKIQSRFDVKITEF
PEEGVDPSTYMNT
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgtctcacgaaggtcaagaagaattattagattattcagattctgaagaaattgctgtt
tcaaccaccactcaagcttctggtgaagctcaatctaatgataaagaaagtgataaaaaa
ggatcttatgttggtatccatgccaccggtttcagagactttttattgaaaccagaattg
ttgagagcaattggggattgtggttttgaacatccttctgaagtccaacaagtttgtatt
cctcaatccattttgggaactgatgttttgtgtcaggccaagtctggtttgggtaaaact
gctgtttttgtattgtcaacattgcaacaattagacccagttccaggtgaaatttccact
ttggttatttgtcatactagagaattggcctaccaaatccgtaacgaatatgccagattt
tccaagtacatgccagatgttaaaactgatgtgttctatggtggtaccccaatcaaaagg
gatattgaaaaattaaagaacaaagatacatgtccacatattgtagtggcaactccaggt
agattacatgctttggttgaagaaaaagctatcagattgaacaatgtcaagtcgtttgtt
attgatgaatgtgacaaagtcttggaatccatcgatatgagaagagatgtgcaagatatc
ttccgtgccactcctcaccaaaagcaagttatgatgttttctgccaccttatctcaagat
attcgtccagtttgtaaaaaatttatgcaaaatccattggaaatttatgttgacgatgag
gccaaattgaccttgcatggtttgcaacaatactacatcaaattggatgagaaagagaag
aatagaaaattgtctgacttgttggattcattggaattcaaccaagtcattattttcgtc
aagtccactagaagagccaacgaattgaacaaattgttgtgtgcttgtaacttcccatcg
attgctgtgcattctggtttaccacaagaagaaagaatcgaaagatacagatcttttaaa
gaatttaataagagaatctgtgtttccactgatgttttcggtagaggtattgatattgaa
agaattaacttggccatcaactatgacttgccaaacgaagctgatcaatacttacataga
gttggtagagctggtagatttggtaccaaggggttagctgtctcttttgtttcttctaaa
gaagacgaggaagtcttggaaaagattcaaagcagatttgatgttaaaatcaccgagttc
ccagaagaaggtgttgatccatctacttatatgaacacttga

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