Candida albicans: CAALFM_C402090CA
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Entry
CAALFM_C402090CA CDS
T00189
Symbol
CaO19.4582
Name
(RefSeq) exosome non-catalytic core subunit
KO
K11600
exosome complex component RRP41
Organism
cal
Candida albicans
Pathway
cal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAALFM_C402090CA (CaO19.4582)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C402090CA (CaO19.4582)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CAALFM_C402090CA (CaO19.4582)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CAALFM_C402090CA (CaO19.4582)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
INTS7_C
Motif
Other DBs
NCBI-GeneID:
3635642
NCBI-ProteinID:
XP_722654
UniProt:
Q5AMR4
LinkDB
All DBs
Position
4:complement(417123..417845)
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AA seq
240 aa
AA seq
DB search
MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRS
QQHSERANIEVNLNIASFSTFERKKRSRNERRLVELKTTLEKTFEESVMINLYPRTNIVI
NVQVLCQDGGMLAAVINSITLALIDAGISMYDYVSGVSCGLYDQTPLLDVNNLEEHDMSC
LTVGVIGKSEKLALMLLEDKMPLDRLESVLSIGIAGSHKIRELMDQEVRKHGIIRASKMQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaattatattcacctgagggacttagaatagacggaagaagatggaacgaattgcgt
agatttgaatgccgtatcaacactcatccaaactcatcggatggctcctcatatgtcgaa
caaggtaataccaaagtgatgtgcacagtacaaggaccaatagaaccagcattaagatct
caacaacattcagaacgagcaaatatagaagtgaatttgaatattgctagtttttcaact
tttgaaaggaaaaaacgaagtagaaatgaaagaagattagttgaacttaaaactacttta
gaaaaaacatttgaagaaagtgttatgataaatttatatccaagaacaaatattgttata
aatgttcaagtattatgccaggatggtgggatgttagctgcagttatcaactctattaca
ttagcactcattgacgctggtatatcaatgtatgattatgtgagtggtgtatcttgtgga
ttatatgatcaaacaccattattagatgtaaataacttagaagaacacgatatgagttgt
ttaacagttggtgttattggtaaaagtgagaaattggcattaatgttgttagaagataaa
atgccattggatagattggaatcagtattgtcaattggtattgctggaagtcataaaata
agagaattaatggatcaagaagtgaggaagcatggaattattagggcttctaaaatgcaa
taa
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