Candida albicans: CAALFM_C403740WA
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Entry
CAALFM_C403740WA CDS
T00189
Symbol
CaO19.1304
Name
(RefSeq) exosome non-catalytic core subunit
KO
K03679
exosome complex component RRP4
Organism
cal
Candida albicans
Pathway
cal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAALFM_C403740WA (CaO19.1304)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C403740WA (CaO19.1304)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CAALFM_C403740WA (CaO19.1304)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CAALFM_C403740WA (CaO19.1304)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
ECR1_N_2
KH_6
RRP40_S1
EXOSC1
DUF2110
Motif
Other DBs
NCBI-GeneID:
3645357
NCBI-ProteinID:
XP_709945
UniProt:
Q59TN2
LinkDB
All DBs
Position
4:795553..796467
Genome browser
AA seq
304 aa
AA seq
DB search
MDISEVISITRPSTFNNIDNINNDDNNLDIEMSDEQDHTQSASATATAAANSIVTPGELI
TEDPTWMKGHGTYFINDKTYSSVAGSISRVNRLLSVIPLRGRYSPETGDHVIGRITDVGN
KRWKVDIGAKQDAILMLGSVNLPGGVLRRKSESDELQMRNFLKEGDLLNCEVQTIFNNGI
ASLHTRSLKYGKLRNGIFLKIPSPLIVKTKNHAFDLPGNVSIVLGTNGYIWLYKTPKINK
SLENNTPGITRLEEESSWEIYSDKNEFIDVQTRNNIAKYYNIIKSLAEKEQKINNDVLVE
AFDY
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatatatctgaagtaataagtataactagaccatctacatttaataatatagacaat
atcaacaatgatgacaacaacttagatattgaaatgtcagatgaacaagatcacacacaa
tcggcatcagcaacagcaacagcagcagcaaattcaattgttacaccaggtgaactaata
acagaagatccaacatggatgaaaggtcatggaacatattttataaatgataaaacctat
tcatccgttgcagggagtatatcaagagtgaatagattattgagtgtgattccattacga
gggagatatagtcccgaaactggtgatcatgtcattggacgtattactgacgttggtaat
aaacgatggaaagtagatattggtgccaaacaagatgctatattaatgttgggatcagtt
aatttacctggtggggtcttacgtagaaaatctgaatctgatgaattacaaatgaggaat
tttttaaaagaaggagatttattaaattgtgaagtacaaacaatttttaataatggtatt
gcttcattacatactagatctttaaaatatgggaaattaagaaatgggatttttttgaaa
attcctagtccattgattgttaaaactaaaaatcatgcatttgatttaccaggtaatgtt
tctatagtgttaggaacaaatggatatatttggttatacaagactcctaaaattaataaa
tctttagaaaataataccccagggataactagacttgaagaagaaagttcatgggaaatt
tatagtgataaaaatgaatttattgatgttcaaacaagaaataatattgccaaatattat
aatatcattaaatcattagctgaaaaggaacaaaaaattaataatgatgttctcgttgaa
gcctttgattattaa
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