Candida albicans: CAALFM_C405630WA
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Entry
CAALFM_C405630WA CDS
T00189
Symbol
CaO19.1248
Name
(RefSeq) DNA-directed RNA polymerase II core subunit
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cal
Candida albicans
Pathway
cal03020
RNA polymerase
cal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAALFM_C405630WA (CaO19.1248)
09124 Replication and repair
03420 Nucleotide excision repair
CAALFM_C405630WA (CaO19.1248)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cal03021
]
CAALFM_C405630WA (CaO19.1248)
03400 DNA repair and recombination proteins [BR:
cal03400
]
CAALFM_C405630WA (CaO19.1248)
Transcription machinery [BR:
cal03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CAALFM_C405630WA (CaO19.1248)
DNA repair and recombination proteins [BR:
cal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CAALFM_C405630WA (CaO19.1248)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
3641812
NCBI-ProteinID:
XP_716556
UniProt:
Q5A462
LinkDB
All DBs
Position
4:1238032..1238988
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AA seq
318 aa
AA seq
DB search
MEIDSHEGPSVTIREAEKDHVNFILKNVDLAVANSMRRTIIAEVPTLAIDLVEIDVNTSV
LADEFLSHRLGLIPLVSEGIDNLTYSRDCTCDNYCSKCSVTLQLIANCATESTMNVYASD
LQKMSHNGSKLGDPVIRDPQARGPLICKLRKHQELSLTCIAKKGIAKEHAKWSPTAAIGF
EYDPWNKLKHTDYWYEVDAEAEWPKSKNCDWEEAPDPEAPFDYKAKPSTYYFDVETVGNL
PPNEVIIKSIETLQTKLAAISIELNKEDVEVNEAAAGGFTSYGRTEYGRTEYGGADGGQT
PGGRTPYGDSGFGGAQWG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagatagtcatgaagggccatcggtcactattagggaagcggaaaaagaccat
gtcaattttatattgaagaatgtcgacttggctgtggcaaactcaatgagaagaaccatt
atagccgaagtgccaacactagcaatagatttggttgaaatagatgttaacacgtcggta
ttggcggatgaattcttgtcccatagattaggattgattcctttagttagtgaaggaatc
gataacttgacttactcacgagattgtacgtgtgacaactactgttctaaatgttctgtg
acattacaattaatagcaaattgtgctaccgagtccaccatgaatgtttatgcttcagat
ttgcaaaagatgtctcataacggctcaaaattgggtgatccagtcatcagagatccccaa
gcaagaggtccattgatttgtaaattaagaaagcatcaagaattatcacttacgtgtatt
gctaagaaaggaatagccaaagagcacgccaaatggtctccgactgcggctatagggttt
gaatatgatccttggaataaactaaaacataccgactattggtatgaagttgacgccgag
gcagaatggccaaaatcgaaaaactgtgactgggaagaagcacctgatccagaggcacct
tttgattataaagcaaaaccatcgacttactattttgatgtggaaactgttggtaacttg
cctccaaatgaagtgattatcaagtctatagaaactttgcaaacaaaattggcagctatt
tcaattgaattaaataaggaagatgttgaagttaatgaagctgcagctggtgggttcact
agttatggtagaactgagtatggcagaacagaatatggtggtgctgatggaggtcaaact
cctggtggtagaacaccatatggtgacagtggtttcggtggtgctcaatggggttaa
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