Candida albicans: CAALFM_C407100CA
Help
Entry
CAALFM_C407100CA CDS
T00189
Symbol
CaO19.3098
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
cal
Candida albicans
Pathway
cal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CAALFM_C407100CA (CaO19.3098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cal03041
]
CAALFM_C407100CA (CaO19.3098)
Enzymes [BR:
cal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CAALFM_C407100CA (CaO19.3098)
Spliceosome [BR:
cal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CAALFM_C407100CA (CaO19.3098)
Complex C
U5 SnRNP specific factors
CAALFM_C407100CA (CaO19.3098)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
BRR2_plug
nSTAND3
AAA_22
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
3642903
NCBI-ProteinID:
XP_715407
UniProt:
A0A1D8PMR5
LinkDB
All DBs
Position
4:complement(1568024..1573987)
Genome browser
AA seq
1987 aa
AA seq
DB search
MSNNVIRQQRDRNHEEEIPASSMTGRISKSDMRSNYKSSPAPAQLNKPPRKEPESEPVDD
QLYELFVTKIRSYLPDSSHEVIQSASEVASEQLSNRDISVPEKRKELEELLNASISDDDL
HELINLSNSIESAKQNHQQGNGDDEFVAIDFNSSDDEEQAIEAEIEVEDESDKETDTEEP
TSNEHPKAYDWHWLQQISEFKHYGSQVFDLLADKDLDSLQLDSKLNELLDSKGMDFIVKC
IEHRWRIVFSKRLQTENKEPVIKEMEELGLHSLINELHRKRSLDDETSNPLKRQKKVKRV
PQKISLDRIVFSTSVENARVTLPEGTIHEVKKSYDTITVPAPAQSLSDNDELLPISTLPD
WAQEAFPKTETTTFNRIQSKIYNQAFETDNNLLICAPTGAGKTNVAMLTILRTIENFRNN
GHIQLKNFKIVYIAPLKALVQEQMREFQRRLTSVYGVVVNELTGDSSLSKQQIAETQIIV
TTPEKWDIITRKDPSYVKLVKLMIIDEIHLLHDERGPVLESLVSRAIRKSETTGSDIRIV
GLSATLPNYADVAKFIRAKPEGLFYFDASYRPCPLEQVYIGVKEQKAIKRIAAMNEACYD
RMHQSLQDRHQLIIFVHSRKETFTTAKYLMEKLDIDIVEQEGVKEILKQEGESMSNPKLK
EVIPRGFGIHHAGLTKKDRGVVEDLFAQGHLRVLVSTATLAWGVNLPAHTVIIKGTETYS
PESGAWVQLSPQDILQMLGRAGRPRYDKNGEGIIITSQDEVQYYLAILNQQLPIESQLIH
KLVDNINAEIVAGSITTIEEGIEWLTYTYFFVRMLQSPALYGVEATYDFTNDPTLYNRRA
DLIYTAFCILHENKLVVYNAALGSVASTELGKIASHFYINFETINLYGKMLKPWHSETDI
LSVFSNSGEFKYVPVRQEERLEISKLMEKCPIPIKEQPNEPLAKINILLQTFISRLSLEG
YALIADMIYITQSAGRLLRALYEIALLQKWSSLAKSILNLCKMVDKRLWLNNSPLRQFGD
VVPHQIIRASEMSHLPWIRYFHLNPDELAVALNLKGNAQIAKQYIDSFPKVSIQYMVQPI
TEQFLRIQVEVIPEWSWISAIHGSQEIFNVFLEGCDGNKLLHSEQFIVKRKNINKPHILE
FFVSFVAPPLPNYILSFVSEKWVHCTWKSSILLSNVISPKVSPHYLDNNVDLVPTETVGD
LFPFTHFNKLQSSTFDTVYNSENNVFIGSSKGDGKTVLAELAILNHWNNKKGRIVYINPC
QELVDKLFKKWSTFFSSYEKEINVLSGNLREDSASVNQSHLILATPEQFNCLSKRWKTRK
AFRSIDLFIWDDLHLVGSDVHYEMLVTRVRMLTSQWDDYKLRIVALSSPVLNSRDIAEWI
GVAKSEMFNFAPHSRENRITEIKLSVESSDNTVKIYKDLAKVNSGLRNTLIFAPSYIHAF
EMAHSMVENNQAQEWRSVDLLKLEKYISKIQNPLLKNLLPKGIAVFYSGMARVDRLIVER
LFESKSIGVLFCTMDTSKFAPTANNVFVAGTRVYDGHEHRFLDYPLNDLYEMVGCCQDGG
VVHIYTTSQMVEFYSSFLNSGLAVESLLSNSLHEFFMDAVANGIIKQRQNCIDVLTFTFF
YRRLLKNPSFYDLKEVSNSGISTYLSELIESVFDDFNKEEFIEEEDEGDTISPLNKIVIA
SHYNSTFETVSNLSKLSNKSKLKDIFHALTNATEFSDLPVREGEDALLIKLQTKLPIKYS
QDDYESPFFKAFILLQAHISRISIPFDLRQDQKSVLTRVLQILNAAIDILSSDGSLNVLL
AMDLSQMIVQAVWSSDNPLRQVPRFTNEILARCTQHNVETVYDIMSLEDEERNEILQLPD
QELNEVASFVNSYPNIELSYEMKGGVTSNESKFVTVTIDRDEEIESLEVVKNENFPVTKQ
ENWWIVVGDSKTRHLYGIKKVNIQKISQSFEIEFTIPNKGKHELTIYLICDSYLDADKEM
EFVIDVV
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaatgttatacgacaacagagagatcgtaaccatgaagaagagattcccgcc
agctctatgactggtcgtatatcaaagagtgatatgagaagtaattacaagtcttcacct
gcaccagcccagttgaataaaccaccacgcaaagaaccagaatcagaaccagtagacgac
caattatatgaactattcgtgactaaaatacggtcctacctacctgattcaagtcacgaa
gtcattcaatcagcatcagaagtggccagcgaacaattgagcaatcgtgatatatctgtc
ccagaaaagagaaaagaacttgaagaactattgaatgcatctatatctgatgatgacctt
catgaattgattaatttatccaactcaattgaatctgccaaacaaaatcatcaacaaggc
aacggagatgacgaatttgttgccatcgactttaattcgtcagatgacgaggaacaggct
atagaagcagagattgaagttgaagacgaaagcgacaaagaaacagacacggaagaaccc
acaagcaacgaacaccccaaagcatacgactggcattggcttcaacagatttctgaattt
aaacattatgggtcacaagtatttgatcttttggctgacaaagatttggatctgctacag
ctagacagtaaactcaacgagttattggattccaaggggatggactttattgtcaaatgt
attgaacatagatggcgtattgtattttccaagagattgcaaacagaaaacaaagaacct
gtcataaaggaaatggaagaacttggtcttcattctttgatcaacgagttgcaccgcaaa
agactgctagatgatgagactagcaacccacttaaacgacaaaaaaaggtaaaacgagta
ccccaaaagattagccttgacagaattgtgttctctaccagtgttgaaaatgcccgtgtg
actttaccagagggtaccattcacgaggttaaaaagtcttacgataccatcactgtccca
gcaccagcacagtctttatccgacaatgatgaattgttgcctatttctactcttccagat
tgggcccaagaagctttccccaaaaccgaaaccactacatttaaccggattcaatcgaaa
atatacaaccaggcatttgaaaccgacaataacttattaatttgtgctcccacgggtgct
ggtaaaacaaatgtggcaatgttaaccatactacgcactattgaaaacttccgtaacaat
ggccacattcaattgaaaaatttcaaaatcgtgtatattgccccgttgaaagcacttgtg
caagaacaaatgcgtgaattccaaagacgtcttacatcagtgtatggggttgttgttaac
gagttgaccggtgacctgtctttgtcgaaacaacaaatagctgaaactcaaatcattgtc
acaacgccagaaaagtgggatatcataaccagaaaagaccccagctatgtgaaattggtc
aaactcatgatcattgatgaaatccatttattgcatgacgaaagaggtcctgttttagaa
agtttggtcagcagagctataagaaaatctgaaactactggttccgatatcagaattgtc
gggctttcggctactttgccaaactatgccgatgtcgcaaagtttatcagggcaaaacct
gaagggttattttactttgacgctagttataggccatgtccattggaacaggtatacatt
ggggtaaaggaacaaaaggctatcaaaagaattgctgccatgaacgaagcgtgctacgac
agaatgcaccaaagtctacaagatcgtcatcaacttatcatttttgtccattccagaaaa
gagacattcaccactgcaaaatatttgatggagaaattagatatcgacatcgtggaacaa
gaaggtgtaaaagaaatattgaaacaggaaggtgagtcgatgtctaaccccaagttaaaa
gaggtcatacccagaggatttgggattcaccatgctggtttgaccaaaaaagataggggt
gtggttgaagacttgtttgctcaaggtcacttgcgtgttcttgtttctaccgccactttg
gcgtggggtgttaaccttccagcacacactgtaattataaagggtacagaaacctattca
ccagaaagtggggcctgggtccaattatcgcctcaggatattttgcaaatgttggggcgt
gctggtagaccacgatacgacaagaatggtgaagggattatcattacatcacaagacgag
gtccaatactacttggccattttgaatcagcagttacctattgaatcacaattgattcac
aaattggtagataatattaatgcagaaattgttgctgggtcaatcaccactatcgaagaa
ggcatagagtggttgacttatacatatttttttgttagaatgttgcagtcgccagcctta
tacggtgttgaagccacatatgactttacgaatgacccaacactttacaaccgaagagct
gatttgatatacactgcattttgtattttgcatgaaaacaagttggtcgtttataacgct
gctttgggttcagtcgcctcaactgagttgggtaagattgcatcacatttctatatcaat
tttgaaacaataaatctatatgggaaaatgttgaaaccatggcacagtgaaaccgatatt
ttgagtgtgttttcaaactcaggcgagttcaagtatgttcccgtgagacaggaagaaaga
ttggaaataagcaagttgatggagaaatgtcctatcccaatcaaagaacaacccaatgaa
ccactagccaaaatcaacatacttttgcagacatttatttctcgattaagtctcgaagga
tatgctttgattgccgacatgatatacattacccaatctgctggaagattgcttagagcg
ttatatgaaatagctttgttgcaaaaatggtcatcattagccaaaagtatcctcaatttg
tgcaaaatggtagacaaacgattgtggctaaacaattcaccattgaggcaatttggtgat
gtcgtccctcaccagatcattcgagcatcagagatgtcacatttgccatggattaggtat
tttcatttaaaccctgatgaacttgctgttgcgttaaatttaaagggaaatgcccaaata
gctaaacagtatatcgattcttttcccaaagtatcaatccaatacatggttcaacctatc
acagaacaatttctacgcatacaggttgaggtgattccagaatggtcttggattctggct
attcacgggagccaagagattttcaatgtttttttggaaggttgtgatgggaataaacta
ttgcatagcgaacaatttatcgtaaaacgcaaaaatattaacaaaccgcatattttggag
ttttttgtttcttttgttgcaccgcctttacccaattatattctatcgtttgtcagtgaa
aaatgggtgcactgtacatggaaaagctctattttattgtctaacgtgatttctcccaaa
gtgtcacctcattacttggataacaatgtggatttagtacctacagaaacagtgggcgat
ttgtttccatttactcatttcaacaaattgcagtcgtcaacgtttgatacagtttacaac
agcgaaaataatgtttttattggctcttccaaaggcgacgggaaaactgttttggccgag
ttggcaatattgaatcattggaataacaaaaaaggcagaatagtatacattaatccgtgc
caggaacttgttgacaaattgtttaaaaaatggtccacattctttctgtcatatgagaag
gaaatcaatgtgttaagtggtaacttgcgtgaagactcggcttctgtgaatcaaagccac
ttgattttggccacgcccgaacagtttaactgtttatcaaagcgttggaaaactagaaag
gcgtttaggtctattgatttatttatctgggacgacttgcatttagttgggtcagatgtt
cactacgagatgcttgtcacaagagttcgtatgttaacctcacaatgggatgactataaa
ctaagaattgttgctttgtcgagccctgtattaaacagtcgtgatattgcagaatggata
ggagtggcgaaactggaaatgtttaattttgctccacatagtcgcgaaaacagaatcacc
gaaattaaactaagtgtcgaaagctccgacaatacagttaaaatttataaagatttggct
aaagtgaatagtggtttgaggaacacgctaatctttgctccatcatatatccatgccttt
gaaatggcacatagtatggtcgaaaataaccaagcacaagaatggagatcagttgattta
ttgaaattggaaaaatatatcctgaaaattcagaatcccttattgaagaacttgttacct
aaaggaattgccgtattctattctggtatggcacgagtcgacagattgattgtggaaaga
ttatttgaatccaagtccattggtgtattgttttgcaccatggatactagcaaatttgca
ccaactgctaataacgtgtttgttgctgggacacgagtatatgatggccacgaacatcga
ttccttgattacccgcttaatgatttgtatgaaatggtaggctgttgtcaagatggcgga
gtggtccatatctatacaacttcgcagatggtcgaattctacagctcgtttttgaatctg
gggcttgcggtagagagcttgctctcaaactctttgcacgagtttttcatggacgctgtt
gccaatggtattattaaacaaagacaaaattgtattgatgtattgacattcacatttttt
tacagaagattgctaaaaaatccaagtttttatgacttgaaagaagtttcgaatagtgga
atttcaacgtatttgtcagaattgatagaaagtgttttcgatgatttcaacaaggaagaa
tttattgaagaagaggacgaaggagataccatcagtccattgaataaaatcgttattgct
tctcattacaacagtacttttgaaacagtatccaacttgagcaagctcagcaataaaagt
aaattgaaagatattttccatgcgttgacaaatgcaactgaatttagtgacttacctgta
cgtgaaggtgaagacgccttgttgattaaacttcaaactaaactaccaataaaatatagt
caagatgattatgaatcaccatttttcaaagcttttatactattgcaggcacatatatca
cgaatcagtatcccctttgatttacgacaagatcagaaatctgttttgactagagtttta
caaattttgaatgcagctatagacattttgtcaagtgatggctcgttgaatgttttatta
gccatggatttatcacagatgatagtgcaggctgtgtggagttctgacaacccattaaga
caagttccgcgcttcaccaacgagattttagctagatgtactcagcacaatgtcgaaaca
gtatatgatataatgtcattggaagacgaagaacggaatgaaatcttgcaattgccagac
caagaattgaacgaagttgcatcgtttgtgaatctgtatcctaatattgaattactgtat
gaaatgaagggcggggttacttctaacgaatcaaaatttgttaccgttacaatcgataga
gatgaagagatcgagtcattagaagttgttaaaaatgaaaattttcctgttaccaagcaa
gagaattggtggattgttgttggcgatagtaagactcgtcatttatatggtataaagaaa
gtcaatattcaaaaaataagccagtctttcgaaatcgagtttactatcccaaacaaaggt
aagcatgaattaacaatttatttgatctgtgattcatatctagacgctgataaagaaatg
gaattcgttatagatgtagtatag
DBGET
integrated database retrieval system
