KEGG   Candida albicans: CAALFM_C500840WA
Entry
CAALFM_C500840WA  CDS       T00189                                 
Symbol
CaO19.587
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
cal  Candida albicans
Pathway
cal03013  Nucleocytoplasmic transport
cal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CAALFM_C500840WA (CaO19.587)
  09122 Translation
   03013 Nucleocytoplasmic transport
    CAALFM_C500840WA (CaO19.587)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C500840WA (CaO19.587)
   03041 Spliceosome [BR:cal03041]
    CAALFM_C500840WA (CaO19.587)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CAALFM_C500840WA (CaO19.587)
Spliceosome [BR:cal03041]
 Complex C
  Other components
   EJC/TREX
    CAALFM_C500840WA (CaO19.587)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CAALFM_C500840WA (CaO19.587)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_EML WDR55 EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_NOL10_N CFAP251_N Beta-prop_HPS5 PEP5_VPS11_N DSE1_N Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_VPS8 WD40_RFWD3 Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_RSE1_1st Cytochrom_D1 Beta-prop_pof12 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_DCAF4 DUF4494 SPP1_Dit
Other DBs
NCBI-GeneID: 3644130
NCBI-ProteinID: XP_714214
UniProt: Q59X91
LinkDB
Position
5
AA seq 397 aa
MCVSVRFFLVVSASLNFSPSIQIHINSILGSKQRKKFWSKRNETKPTNILTNLPPPFPKM
SSPNDRNKKFFNSLTPIVLRDKPISSYASSEIITVAINQTGTRVVYSRTDRSVRIWKCLP
ASVVDPKTIVDAHSKAVECLSFNPMTEFTFATVAKDEYVKIWNANTGDKLHEIKCEFDSL
KLVRYSNDGQLLVVVDRASNFLFFNVGANYKLIHKFKLDEHIYDLKWFNHDHQFFLVSSH
DGSILLYEIIDGDGDNELSSKLRASVSGHNSSITTIAISPKGNYFTVGSSEGVISFWKTL
ENLINSKVITDVDQSIAQLDISRDGTYLAVAYDTDSNSRIYEAEGSELVHEIPNSGSGNQ
TFSSIVWFPTKTGFAYTSDHGTVLTVMIKPIEQKHRR
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgtgtgtgtctgttcgtttttttctcgttgtctctgcctcgttgaatttttcaccttcc
atccaaatccacatcaattccattcttggcagtaaacaaagaaaaaaattctggtcaaaa
cgaaacgaaacgaaaccaaccaatatactaaccaacttaccaccccctttcccaaaaatg
ctgagtccaaatgatagaaataaaaaattctttaatagtttaactccaatagttttaaga
gataaaccaatttcaagttatgcttcatcagaaattataacagttgcaattaatcaaact
ggtactagagtggtatattcacgtacagatagatcagtaaggatttggaaatgtcttcct
gcttcagtagttgacccaaaaactattgttgatgcccatctgaaagcagtcgaatgttta
tctttcaatccaatgacagaattcacgtttgcaacagtggctaaagatgaatatgtcaaa
atttggaatgctaatactggggataaattacatgaaataaaatgtgaatttgattcgtta
aaattggttcgttattcaaatgatggacaattgttagtggttgtggatagagcatctaat
ttcttgtttttcaatgttggagcaaattataaattaattcataaattcaaattagatgag
catatctatgatttaaaatggttcaatcatgatcatcaatttttccttgtatcttcacat
gatggaagcatacttttatatgaaattattgatggtgatggagacaatgaactatcttca
aaattaagagcatcagtgtctggtcacaattcatcaatcactaccattgctatatcgcca
aaaggtaattattttacggttggaagtagtgaaggggtgataagtttttggaaaacttta
gagaatctaattaatctgaaagtgattactgatgttgatcaaagtattgcccaattggat
atcagtagagatggtacttatttggcagtcgcatatgatactgatagtaatctgagaata
tatgaagctgaaggaagtgaattggttcatgaaatacccaatagtggcagtgggaaccaa
acttttagctcaatagtgtggttcccaacgaaaacaggattcgcatataccagtgaccat
ggtacagttttaactgttatgattaaaccgatagaacagaaacacaggcgataa

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