Candida albicans: CAALFM_C601920CA
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Entry
CAALFM_C601920CA CDS
T00189
Symbol
CaO19.684
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cal
Candida albicans
Pathway
cal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CAALFM_C601920CA (CaO19.684)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cal03021
]
CAALFM_C601920CA (CaO19.684)
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C601920CA (CaO19.684)
Transcription machinery [BR:
cal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CAALFM_C601920CA (CaO19.684)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CAALFM_C601920CA (CaO19.684)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pfc11_Clp1_ID
Pcf11_C
CID
zf_PCFS4
Birna_RdRp_C
DHH_CID
Med30
zf-C2HC_2
ParD
Motif
Other DBs
NCBI-GeneID:
3644534
NCBI-ProteinID:
XP_713817
UniProt:
A0A1D8PPQ9
LinkDB
All DBs
Position
6:complement(394669..396216)
Genome browser
AA seq
516 aa
AA seq
DB search
MTDILEAYKQSLSELTFNSRPIIDNLTIIAKENPNVADGIVDLITQRIYKTIPDQKLFAL
YLLDSICKIIGNPYNILAGDEIFNLYSHVFQLVNETIRNKLVNLFETWKITKTRGTNDPL
FPKAQLDKIDSFLKKAGYPKAKTNSGVMSQQSLVNDINQLIPIFEKKVRTNPNSKSQDRL
RALNQLRSILSSQVMKANELQAIQNQLQNIKEQELSSSSSSASKGGTPIPTPGPTPATTP
GPSSIPPVSRVNPAFMIFNDLVLSGLVKKDQEPIPGSKPVYSLVFPQTKYVPSASGLGSN
STLEDLLLSSSSIQRSDYDKLKFTEMVKVSKLSFNNLQDFIKNNKPTTKLRDLLYDSKPS
KCSICGKRFASDKEGADKKRLHLDWHFRINKKLSNKGSNVQSRNWYLDDYEWVHFNENDL
LEYSTDVRIPDITQEMDETISTDSQYVIVPSTETNMNNKCLICREQIKATYNDEIGEWCW
YNCIRQPGEPKNSRKIVHVTCYNESSKKRPADNDDL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgacagacattttggaagcatacaaacaaagcttgtctgagttaacatttaattcacgt
ccaataattgataatttaactataatagcaaaagagaatccaaatgttgccgatggaatc
gtcgatttaataactcaacgaatttataaaactattccagaccagaaattatttgcattg
tatttactagattctatatgcaaaattattggtaacccttataacatattagctggagat
gagatttttaatttatattctcatgtatttcaattagtcaacgagacaattcgtaacaag
ttggtgaacttgtttgaaacatggaaaataaccaaaacaagaggtaccaatgacccttta
tttccgaaagcacaattagataaaatagattcatttttgaagaaggcagggtacccgaag
gccaaaacaaactcgggtgtaatgtcccaacaatccctagtgaacgatattaaccaatta
attcctattttcgaaaaaaaagtacgaactaacccaaactccaagtcacaagatagactt
cgggcattaaatcaattaagatcaatactttctagccaagtgatgaaagctaatgaatta
caggctattcaaaatcaactacaaaacattaaggagcaagaactctcatcgtcatcttct
tcagcatcaaaaggtggcacccctattcctaccccaggaccaactcctgccactacgccg
ggaccctcttcgattccacctgtgtctagggtgaacccggcattcatgatattcaatgat
ttggttctttcagggttggttaaaaaggatcaagaaccaatccctggatctaaaccagtt
tactcgttggtttttccacaaaccaaatatgtaccatcagcaagtggtctcggctctaat
agtactttagaagatttattgttatctagtagttcaatacaaagatctgattatgataaa
ttgaagtttacggaaatggttaaggttagtaaattgtctttcaacaatttgcaagacttt
attaaaaataataaacctacaacaaaattgcgtgatttgctttatgattcaaaaccatcc
aaatgttcaatttgtggtaaaagatttgcatctgataaagaaggggcagataaaaagaga
ttacatttagattggcattttagaatcaacaagaagctctctaataaaggcagtaatgtt
caatctcgaaattggtatctagatgattatgaatgggttcattttaatgaaaacgatctt
ttggagtattcgacagatgtaagaataccagatattactcaggaaatggatgaaactatt
tcaaccgatagccaatacgtgattgttccatcaacagaaacaaatatgaacaataaatgc
ttaatctgtcgtgagcaaatcaaggctacttataatgatgaaattggagaatggtgctgg
tacaattgtattagacaacctggagagcctaaaaatagcagaaaaattgtccatgtcact
tgttataatgaatccagcaagaagagaccagcggacaatgatgatttg
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