KEGG   Candida albicans: CAALFM_C702510WA
Entry
CAALFM_C702510WA  CDS       T00189                                 
Name
(RefSeq) U6 snRNA complex subunit
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
cal  Candida albicans
Pathway
cal03018  RNA degradation
cal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CAALFM_C702510WA
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAALFM_C702510WA
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C702510WA
   03041 Spliceosome [BR:cal03041]
    CAALFM_C702510WA
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CAALFM_C702510WA
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CAALFM_C702510WA
Spliceosome [BR:cal03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CAALFM_C702510WA
SSDB
Motif
Pfam: LSM SelK_SelG
Other DBs
NCBI-GeneID: 30515357
NCBI-ProteinID: XP_019331036
UniProt: A0A1D8PR50
LinkDB
Position
7
AA seq 130 aa
MLPLYLLTAAKNKPILIELKSGETYNGNLTNCDSWMNLTLHNVIQTDSRGEKFMKIPEIY
IRGIHIKYLRIPDDIMGYAKEQSMINMENRNRYQKRRGTSSGGGGGGGGGSGDSRRFNNR
QSHGHNYGRR
NT seq 393 nt   +upstreamnt  +downstreamnt
atgcttccattatatttattaacggcagcgaaaaataaaccaatattaattgaattaaaa
tctggagaaacttataatgggaatttaaccaattgtgattcatggatgaatttaacctta
cataatgttatacaaaccgattcccgaggtgagaaatttatgaaaattcccgaaatatat
attcgtggtatacatattaaatatttaagaattcctgatgatattatgggatatgcaaaa
gaacaaagtatgataaatatggaaaatagaaatcgataccaaaaaagaagaggtactagc
agtggtggtggtggtggtggtggtggtggaagtggtgattcaagaaggtttaataataga
caactgcatggacataattatggacgtagatga

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