Candida albicans: CAALFM_C702510WA
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Entry
CAALFM_C702510WA CDS
T00189
Name
(RefSeq) U6 snRNA complex subunit
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cal
Candida albicans
Pathway
cal03018
RNA degradation
cal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CAALFM_C702510WA
09123 Folding, sorting and degradation
03018 RNA degradation
CAALFM_C702510WA
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C702510WA
03041 Spliceosome [BR:
cal03041
]
CAALFM_C702510WA
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CAALFM_C702510WA
mRNA degradation factors
5'-3' decay
Lsm complex
CAALFM_C702510WA
Spliceosome [BR:
cal03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CAALFM_C702510WA
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SelK_SelG
Motif
Other DBs
NCBI-GeneID:
30515357
NCBI-ProteinID:
XP_019331036
UniProt:
A0A1D8PR50
LinkDB
All DBs
Position
7
Genome browser
AA seq
130 aa
AA seq
DB search
MLPLYLLTAAKNKPILIELKSGETYNGNLTNCDSWMNLTLHNVIQTDSRGEKFMKIPEIY
IRGIHIKYLRIPDDIMGYAKEQSMINMENRNRYQKRRGTSSGGGGGGGGGSGDSRRFNNR
QSHGHNYGRR
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgcttccattatatttattaacggcagcgaaaaataaaccaatattaattgaattaaaa
tctggagaaacttataatgggaatttaaccaattgtgattcatggatgaatttaacctta
cataatgttatacaaaccgattcccgaggtgagaaatttatgaaaattcccgaaatatat
attcgtggtatacatattaaatatttaagaattcctgatgatattatgggatatgcaaaa
gaacaaagtatgataaatatggaaaatagaaatcgataccaaaaaagaagaggtactagc
agtggtggtggtggtggtggtggtggtggaagtggtgattcaagaaggtttaataataga
caactgcatggacataattatggacgtagatga
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