KEGG   Candida albicans: CAALFM_CR00240WA
Entry
CAALFM_CR00240WA  CDS       T00189                                 
Symbol
LSM6
Name
(RefSeq) U4/U6-U5 snRNP complex subunit
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
cal  Candida albicans
Pathway
cal03018  RNA degradation
cal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CAALFM_CR00240WA (LSM6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAALFM_CR00240WA (LSM6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_CR00240WA (LSM6)
   03041 Spliceosome [BR:cal03041]
    CAALFM_CR00240WA (LSM6)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CAALFM_CR00240WA (LSM6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CAALFM_CR00240WA (LSM6)
Spliceosome [BR:cal03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CAALFM_CR00240WA (LSM6)
SSDB
Motif
Pfam: LSM SM-ATX LSM14 Hfq RimP_C RnlA-toxin_DBD
Other DBs
NCBI-GeneID: 30515363
NCBI-ProteinID: XP_019331045
UniProt: A0A1D8PRP0
LinkDB
Position
R
AA seq 80 aa
MADNTEFEKTDPSKFLSGIIGSSVSVKLHNGVEYKGNLQTIDGFMNVVLDEGKETVNGKV
TKKYGDVFIRGNNVLYISEA
NT seq 243 nt   +upstreamnt  +downstreamnt
atggccgacaatacagaatttgaaaagacagatccatcaaagtttttgagtggaataata
gggtcttctgtgagtgtaaagttacacaatggtgttgaatataaaggaaatttgcagaca
attgatgggtttatgaatgtggtattagatgaaggtaaagaaactgtcaatgggaaagtg
actaaaaaatatggagatgtgtttattagagggaataatgtgttatatataagtgaagct
tga

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