Candida albicans: CAALFM_CR05560WA
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Entry
CAALFM_CR05560WA CDS
T00189
Symbol
CaO19.5846
Name
(RefSeq) TFIIH/NER complex subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cal
Candida albicans
Pathway
cal03022
Basal transcription factors
cal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CAALFM_CR05560WA (CaO19.5846)
09124 Replication and repair
03420 Nucleotide excision repair
CAALFM_CR05560WA (CaO19.5846)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cal03021
]
CAALFM_CR05560WA (CaO19.5846)
03400 DNA repair and recombination proteins [BR:
cal03400
]
CAALFM_CR05560WA (CaO19.5846)
Transcription machinery [BR:
cal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CAALFM_CR05560WA (CaO19.5846)
DNA repair and recombination proteins [BR:
cal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CAALFM_CR05560WA (CaO19.5846)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
3647592
NCBI-ProteinID:
XP_710801
UniProt:
Q59M53
LinkDB
All DBs
Position
R:<1185511..>1186995
Genome browser
AA seq
494 aa
AA seq
DB search
MSSHLFKATVNEYLEGLPKTVQSKLYEAPATCLSIFRLLSPMAKFYIMSMIFNEKPIALR
DLDKWCKPSARKLEFEALKRLESLHLIEYDSKGSHVRLHSIFRKNFRDCLTGSQNPNAFG
SISTTVDKHKVDIPFLDLFASQKWETILHFMVGTESTATPSDSVLSLLKLGGLMEGPNND
LRITNSGFQFLLQDVNAQIWTLLLQYLNLTQELNMDPVDVLNFIFVLGSLELGKSYSVLS
LSETQVSMLADLKDYGLVYQRSDTSGRFYPTRLATTLTSDSAALKTPSMAMDEEEQQVAT
KESIIIETNFKIYAYTKSPLEIAILNLFVHFKTRFANMVCGQITRESIRNALYNGITADQ
IIKFLETHAHPQMRILAKEKLDKKIEFDTSHNINTAGGAPQSKTDGMVSQHKLEILPPNV
VDQIKLWQLELDRIQTFDGYLFKDFSNQQEYDILSNYASELGVLIWADKVKKKFFVTKDG
MTQVADFANRKLKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcacttgttcaaggcgacggtaaatgaatatctcgaaggactcccgaaaaca
gtccaatccaaactatatgaagcaccagctacgtgtttgtcgatattccgattactttcg
ccaatggccaaattctacatcatgtcaatgatattcaatgaaaaaccaattgcattaaga
gatttagacaaatggtgtaaaccactggcgaggaaattggaatttgaagcattgaagaga
ttggaatctctacatttaatagaatatgatagtaaaggttctcatgtcagattgcattct
attttcaggaaaaactttcgtgattgtttgacgggatcacaaaatccaaatgcatttgga
agtataagtaccacagtggataaacataaagttgatataccattcctagatttgtttgca
tcgcagaaatgggaaactattttacatttcatggtgggtaccgaatcaacggccactcct
tctgattcagttttaagtctacttaaattgggtggattaatggaaggccccaacaatgat
ttaagaattacaaatagtgggttccagtttttgttacaagatgttaatgcacaaatttgg
acattgctattacaatatttgaacttgacacaggaattgaatatggatccagttgatgtg
ttgaattttatatttgtattggggtcattggaattgggtaaaagttactctgtattaagc
ttaagtgaaactcaagtgagtatgttggcagatttaaaagattatgggttggtttatcaa
cgatcagacacttctggaaggttctacccaacaagattggcaaccacgttaacttctgat
tcagcagcattgaagacgccatctatggcaatggatgaggaagaacaacaagttgcaaca
aaggaatcgattatcatagaaacaaatttcaaaatttatgcatacacaaagtcaccatta
gaaatagccattctaaatttgtttgtgcattttaaaaccagatttgccaatatggtatgt
gggcaaattacaagagaatctataagaaacgccttatataatggtataactgcagatcag
attatcaaatttttggaaacccatgcacatccacaaatgagaatattagcaaaagagaaa
ttggataaaaaaattgaattcgataccagtcacaatatcaatactgctggtggtgctcct
caaagtaaaactgatgggatggtttcacaacataagttggaaatactccctcctaatgtt
gttgatcagatcaagctatggcagttggaattagatagaattcaaacttttgacggatac
ttgtttaaagatttctccaatcaacaagaatatgatatattatctaattatgcttctgag
ctaggggtattgatctgggcagataaagtgaagaagaaattctttgtcactaaagacggc
atgactcaagttgctgattttgcaaacagaaaattgaaacgttga
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