KEGG   Candida albicans: CAALFM_CR08930CA
Entry
CAALFM_CR08930CA  CDS       T00189                                 
Symbol
CaO19.7290
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cal  Candida albicans
Pathway
cal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAALFM_CR08930CA (CaO19.7290)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_CR08930CA (CaO19.7290)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CAALFM_CR08930CA (CaO19.7290)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CAALFM_CR08930CA (CaO19.7290)
SSDB
Motif
Pfam: LSM FmiP_Thoc5
Other DBs
NCBI-GeneID: 3641913
NCBI-ProteinID: XP_716425
UniProt: A0A1D8PTV1
LinkDB
Position
R:complement(1913084..1913587)
AA seq 167 aa
MSSVSSQSEQSRASDPLFQNVEDLYLESYAFTTAAAIVGSVDRKIFVLLKDGRNLFGILR
TFDQFANLVLQDTLERIYLGEEGEAPTRFSETYRGVFMVRGENVVMLGEMDIDTEDDHLE
KLEQVPFEVAQRELKEQQAKKIREQKVKTKQLLQKGLINDFHITDLY
NT seq 504 nt   +upstreamnt  +downstreamnt
atgtcaagtgtatcatcccaatcagaacagtctcgagcatcagatccattattccaaaat
gtggaggatttgtatttggaaagttatgcatttaccacagcagctgcgatagttggttca
gtggatagaaagatatttgttttattgaaagacggtaggaatctttttggtatattaaga
acatttgatcaatttgccaatcttgtattacaagacactttggaaagaatatatttggga
gaggaaggtgaggcccctacccgtttttctgagacttatcgtggtgtgtttatggtgaga
ggtgagaacgttgttatgttaggagaaatggatattgatacagaagacgaccatttagag
aaattagagcaagtgccatttgaggtggcgcaacgtgagttgaaagaacaacaagcaaaa
aagatcagagaacaaaaagtaaagacaaagcagttattacaaaaaggtttgattaatgat
tttcatataacagatttgtattaa

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