KEGG   Candida albicans: CAALFM_CR09480WA
Entry
CAALFM_CR09480WA  CDS       T00189                                 
Symbol
CaO19.7343
Name
(RefSeq) U4/U6-U5 snRNP complex subunit
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cal  Candida albicans
Pathway
cal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CAALFM_CR09480WA (CaO19.7343)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cal03041]
    CAALFM_CR09480WA (CaO19.7343)
Spliceosome [BR:cal03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CAALFM_CR09480WA (CaO19.7343)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 NBCH_WD40 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_RIG_1st Cytochrom_D1 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N RMC1_N
Other DBs
NCBI-GeneID: 3641939
NCBI-ProteinID: XP_716477
UniProt: A0A1D8PU02
LinkDB
Position
R:2021791..2023167
AA seq 458 aa
MEVDKLDHEIRVKEQEEEEEEEEEEVFYTPGPKELYDVRLEVLNYSLKQSAIRLQKLRQL
KQSTTTTTPTTTLTTGIPSQDEINILKSRRQLNSNLSKYEIYGSQFIPGTTRTISNIKIS
NNDKYIACGSWDGSINLLNSQDLSIFKKTPSGFHNEKISGLSWNNNDNQLVSGGNEGTIN
IWNVNENNNNNNNNNNNNNNEKDQNGLLLSSPIVSIKQAHNDRITKTLFHPINNLIISTS
FDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLR
SGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLKIWDLRKLENNNSNNELYSIPAHT
KLITDVKFYHQSRDIMQKQQQQQDQQQDQDHLLGSEFNDGKFLVSCSYDGDVNIWSSDNW
IKIKSLRGHTDKVMSCDINSTGKWIVSSGWDRSIKLWK
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggaagttgacaaactagatcatgaaataagagtgaaggaacaagaagaagaagaagag
gaggaggaggaagaagttttttataccccaggaccaaaagaattatatgatgttagatta
gaagtactaaattattcattgaaacaatcagctattcgattacaaaaactacgtcaacta
aaacaatccaccacaaccaccacaccaacaacaacactaacaactggaataccttcacaa
gatgaaattaatatattaaaatcaagacgtcaattaaattctaacctatcaaaatatgaa
atttatggatctcaatttataccaggaactacaagaacaatatcaaatattaaaatttct
aataatgataaatatattgcttgtggatcatgggatggatcaataaatttattaaatagt
caagatttatcaatttttaaaaaaactccatcaggtttccataatgaaaaaatatcagga
ttaagttggaacaataatgataatcaattagtatctggaggtaatgaaggaaccatcaat
atttggaatgtcaatgaaaacaacaacaacaacaacaacaacaacaacaacaacaacaat
gaaaaagaccaaaatggtttattattatcgtcaccaatagtttcaattaaacaagctcat
aatgatagaatcacaaaaacattatttcatccaataaataatttaattatttctacatca
tttgatcaaacttggaaattatgggatttgaataaattatcaggacaaagagacgattta
caatgtttagttgaacaagaaggtcattcaaaacctatttttacaggagaaattcatcct
gatggtggattatttatgagtggtggccttgatggtattgttcatatttgggatttacga
tcaggtagatcaattgtaacattacaaaaacatatggcgggagtatattgtttagattgg
tcacctaatggatatcaatttgtcactggtagtggtgattgtagtttaaaaatttgggat
ttaaggaaactcgaaaataataattccaataatgaattatattcaattccggctcatact
aaattaattactgatgttaaattttatcatcaaagtagagatataatgcagaaacaacaa
caacaacaagatcaacaacaagatcaagatcatttattgggatcagagtttaatgatggg
aaattcttagtgagttgttcttatgatggtgatgttaacatctggtcaagtgataattgg
attaaaatcaaaagtttaagaggtcatactgataaagtaatgagttgtgatattaatagt
actggtaaatggatagtaagtagtggctgggatagatcaataaaattatggaaataa

DBGET integrated database retrieval system