Chenopodium album (lamb's quarters): 145558620
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Entry
145558620 CDS
T11950
Symbol
LOC145558620
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
calb Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
calb04131
]
145558620 (LOC145558620)
Membrane trafficking [BR:
calb04131
]
Protein recycling
Others
EARP complex
145558620 (LOC145558620)
Endosome - Golgi transport
Tethering complex
GARP complex
145558620 (LOC145558620)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
COG4_N
Vps54_N
DUF8567
MPH2
Rv0250c
MAL13P1_147_C
XhlA
Motif
Other DBs
NCBI-GeneID:
145558620
NCBI-ProteinID:
XP_081476041
LinkDB
All DBs
Position
9:complement(58831455..58850376)
Genome browser
AA seq
827 aa
AA seq
DB search
MSVPRSMDKSSALEYINQMFPTEASLSGVEPLMQKIHGEIRRVDASILGAVRQQSNSGTK
AKEDLAAATRAVQELMYKIREIKNKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRL
TMLVSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKQILK
SHVFSDFSSLGTGKETEETNLLQQLSDACLVVDALEPSVREELVKIFCNRELTSYRQIFE
GAELAKLDKTERRYAWIKRRLRTNEEIWKIFPSSWHVPYLLCIQFCKLTRTQLEEILDNM
KEKPDVGTLLLALQRTLEFEEELAEKFGGSSPAKETNHDTGDVERGPNFSQAVSDIKKKY
EKKLAANQGSGTDETDGLKEFSVPGAGFNFRGIISSCFEPHLNVYVELEEKTLMDHLEKL
VQEETWDTEEGSQTNILSSSMQVFLIIRRSLKRCSALTKNQTLFNLFKVFQKILKAYATK
LFARLPKGGTGIVAAATGTDGQIKTSEKDERMICYIVNTAEYCHKTSGELAENIAKVIEP
VFADKVDMSEVQDEYSAVITKSLITLVQGLETKFDIEMASMTRVLWATLESVGDQSEYVN
GINTIITSSIPILGTLLSPIYFQFFLDKLASSLGPRFYQNIFKCKQISETGAQQMLLDTQ
AVKTILLEVPSLAKQTSGAANYSKYVSREMSKAEALLKVILSPLDSVADTYRALLPEGTT
SEFQRILELKGLKKADQQTILDDFNKHGPSIKHPSMTSAVTIAPAPPAVPAISSPATSAV
AASREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttcctcgatctatggataagtcaagtgctcttgaatacattaatcagatgttt
cctacagaggcgtcgttatctggtgttgagcctctaatgcaaaagattcatggtgaaatc
cgtcgagtggatgcttccatactgggagctgttcgacagcagagtaattcaggtaccaag
gccaaagaagatcttgctgctgctacgcgtgcagtgcaggaactcatgtacaagatacgg
gagataaaaaataaggctgagcaaagtgagacaatggttcaggaaatttgtcgtgacata
aagaagctcgattttgcaaagaagcacataacaactactattacagcacttcatcgtctt
accatgttagtatctgctgttgagcaacttcaagtgatggcttcaaaaagacaatataag
gaggcagctgctcaattggaggcagtaaatcagttatgcagtcattttgaagcctatagg
gatgtccctaaaataacagaattgcgtgagaagttcaagaatattaaacaaatcttgaag
tctcatgttttttctgacttctcaagcctgggtactgggaaagagacagaagaaactaat
ttactgcagcagctatcagatgcttgtttggtggttgatgcattggagccttctgtacga
gaagaacttgttaaaatattctgtaacagggaacttacttcctatagacaaattttcgaa
ggagctgaacttgcaaagttggataaaacggaaaggagatatgcttggatcaagcgtcgg
ttgagaacaaatgaggagatatggaaaattttcccttcttcatggcatgtcccttattta
ctatgcatccaattctgcaagctcacaagaacacaacttgaggaaatacttgataacatg
aaggagaaaccagatgtggggacactgctgctggcacttcagcgaactttggaatttgaa
gaagaactggcagagaaatttggaggaagttcaccagctaaagagaccaatcatgacact
ggtgatgtagaaagagggcccaatttcagtcaagctgtatcagatatcaaaaagaaatat
gaaaagaagctcgctgctaatcaaggcagtggaactgatgaaactgacggtcttaaagaa
ttttctgtgcctggagctgggttcaatttccgtggaatcatctcatcttgctttgaacct
catctaaacgtgtatgttgaattggaagaaaaaacactgatggatcatctggagaaactt
gttcaggaagaaacttgggataccgaagaaggaagtcagacaaatatcttatccagtagc
atgcaggtctttctgataatcagacgaagcttgaagagatgcagtgctttgacaaagaat
cagacattatttaatctgtttaaggtgtttcaaaaaattcttaaagcttatgcaacaaag
ttgtttgccagactgccaaagggcgggacaggaattgtggctgcggccactggaacagat
ggacaaattaagacatctgaaaaagatgaaaggatgatctgctatatagtgaacactgct
gaatactgtcataaaacgtcaggtgaattggctgaaaatatagctaaggttattgaaccc
gtatttgcagataaagttgatatgtcagaagtacaggacgaatattcagcagtaattaca
aaatcattgataacactggtgcaaggtttggaaactaaatttgatattgaaatggcttct
atgacacgtgttttatgggcgactcttgaaagtgttggcgaccaatcagagtatgttaat
ggaataaatacaataattacaagcagtatacctatactcgggacacttctgtctccaatt
tacttccagtttttcttggacaagcttgcttcttcacttggtccccgtttctatcagaac
atattcaaatgcaagcagatatcagaaactggagcccagcagatgctgttggatactcaa
gctgtgaaaacaattcttttggaggttccttctcttgctaaacaaacatctggtgctgct
aattactccaaatacgttagccgtgagatgagtaaagcagaggcccttttgaaggttata
ttgtctcctttagattctgtagcagatacttatcgtgctttattaccggaaggaactacg
tcagaatttcagcgaatcctggagctcaagggtcttaaaaaagctgaccagcaaaccata
ctagatgattttaacaaacatggtccaagcattaagcatccatcaatgacctctgcggtt
acaattgctcctgctccacctgcagtgccagctataagcagtcctgctacatcagctgtt
gctgcttctcgagaagatgtgcttgcaagagctgctgcattgggtcgaggagcagccact
actggtttcaagcgattccttgcactaactgaagctgctaaggatagaaaggatgggcct
ttcagaaaactctttaatccatga
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