Chenopodium album (lamb's quarters): 145558796
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Entry
145558796 CDS
T11950
Symbol
LOC145558796
Name
(RefSeq) TATA-box-binding protein isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
145558796 (LOC145558796)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
calb03000
]
145558796 (LOC145558796)
03021 Transcription machinery [BR:
calb03021
]
145558796 (LOC145558796)
Transcription factors [BR:
calb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
145558796 (LOC145558796)
Transcription machinery [BR:
calb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
145558796 (LOC145558796)
RNA polymerase III system
TFIIIB
145558796 (LOC145558796)
RNA polymerase I system
SL1/TIF-1B
145558796 (LOC145558796)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
145558796
NCBI-ProteinID:
XP_081476256
LinkDB
All DBs
Position
9:65278291..65283250
Genome browser
AA seq
200 aa
AA seq
DB search
MAEQGLEGSQPVDLLRHPSGIVPTLQNIVSTVNLDCKLELKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSESQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFRKSQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaaggcttggaaggtagccaaccggtcgatttgttgaggcatccatctggg
attgtcccaactcttcagaatattgtctcaactgtcaatttggactgcaagttagaactt
aaagcgattgcattgcaagctcgtaatgcagagtataacccaaagcgttttgctgcagtg
attatgaggataagggagccaaagacaactgccttaatctttgcttcaggcaaaatggtc
tgtactggagctaagagtgagagtcagtcaaaactagctgctcgcaagtatgctagaatc
attcagaagcttggatttcctgcaaaatttaaggatttcaagattcaaaatattgttgga
tcatgtgatgttaagtttcctatcagactggaggggcttgcatattctcatggtgctttc
tctagttatgaaccagaactattccctggcttgatttaccgaatgaagcaacccaagatt
gtgttgcttatatttgtgtctgggaaaattgttctcacaggagcgaaggtgagagaagag
acttataccgcatttgagaacatttatccagtgcttaccgagtttaggaaaagccagcaa
tga
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