KEGG T11950: 145564161

Chenopodium album (lamb's quarters): 145564161

Entry

145564161         CDS       T11950

Symbol

LOC145564161

Name

(RefSeq) uncharacterized protein At4g14342

K12832

splicing factor 3B subunit 5

Organism

calb Chenopodium album (lamb's quarters)

Pathway

calb03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:calb00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    145564161 (LOC145564161)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:calb03041]
    145564161 (LOC145564161)
Spliceosome [BR:calb03041]
Complex A
  U2 snRNP components
   U2 snRNP specific factors
    145564161 (LOC145564161)
Complex B
    145564161 (LOC145564161)
Complex C
   U2 SnRNP specific factors
    145564161 (LOC145564161)

SSDB

Motif

Pfam:

SF3b10 TAM12 BcGHD HA_Alsin

Other DBs

NCBI-GeneID:

145564161

NCBI-ProteinID:

XP_081480624

LinkDB

Position

10:complement(54984904..54987666)

AA seq 87 aa
MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPMLAYFAVAEN
ESIGRERYNFMQKMLLPCGLPPEREDD

NT seq 264 nt +upstreamnt +downstreamnt
atgcaggccagtgatagatttaacatcaattctcagcttgagcaccttcaagctaaatat
gttgggactgggcatgcagatttgaacagatttgaatgggctgttaacatccaacgtgat
agctatgcttcctatgttgggcattacccaatgcttgcatactttgctgttgcagaaaat
gagtctattggaagagaacgttacaacttcatgcagaaaatgctgctaccttgtggcctt
cctcctgaaagagaagatgattga

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