Chenopodium album (lamb's quarters): 145564223
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Entry
145564223 CDS
T11950
Symbol
LOC145564223
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
calb
Chenopodium album (lamb's quarters)
Pathway
calb04120
Ubiquitin mediated proteolysis
calb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
145564223 (LOC145564223)
04120 Ubiquitin mediated proteolysis
145564223 (LOC145564223)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
calb04121
]
145564223 (LOC145564223)
Enzymes [BR:
calb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
145564223 (LOC145564223)
Ubiquitin system [BR:
calb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
145564223 (LOC145564223)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
FlxA
zf-RING_Vps41
zf-RING_11
zf-RING_16
zf_RING_Vps8
PHD_NSD
HR1
zf-HC5HC2H
zf-RING-like
FAR1_N
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
145564223
NCBI-ProteinID:
XP_081480679
LinkDB
All DBs
Position
10:56090233..56095735
Genome browser
AA seq
545 aa
AA seq
DB search
MMVRLKPYAGLSLFAAIAVVYHAFHSRRQFYPAMVYLSTSKISLVILLNMGLVILCSLWQ
LAKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKSLHWL
AQKRVEFIETTPAVPTLSHVRIVSFMGFLLFLDSIFLYSSVKSLIETQTASVSIFFSFEY
MILATTTVAMFMKYIFYVSDMLMDGQWEKKAVCTFYLELIRDLLHLSMYLCFFMVIFVNY
GVPLHLIRELYETFRNFKIRIADYIRYRKITSNMNDRFPDATPEELDTSDATCIICREEM
TTAKKLRCGHFFHVHCLRSWLERQNTCPTCRALVLPPETGAVSAGGQHGPHSGVQQSAST
NTSGQGSTSGTVTDSPLSGNQARLQAAAAAAAVYEKSLVYPSANTLVWAPGYAVLPQVHG
AMPGSSNANSDEGVGPVGQVQHQQVMSSEQMSFPYVQAPPFSVSSIQVPGTDMLREESSH
LSVESQRNFLEHQIQLLQSQLEYLRKQQVDKGASSSHSVSTVTNVTTTESSSDATSHTNI
QESNL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaggctaaagccatatgccgggcttagtttgtttgcagcaattgctgttgtt
tatcatgcatttcacagtagaaggcagttttaccctgctatggtatacctttcgacttcg
aagatcagtttagttatacttctcaatatgggtttagttatactatgttctttatggcaa
ttggcaaaacgtgtgtttcttggttctcttcgagaggctgaggttgagaggctgaatgaa
cagtcatggagggaggttatggagattctgtttgccatcactattttccggcaggatttt
tctgtttcgtttcttgctatggttactgcgcttttattaattaagtcgcttcattggctg
gcccaaaagagggttgaattcatcgaaacgactccagctgtgcccaccttgtctcatgta
aggattgtctcttttatgggcttccttcttttcttggacagtatcttcttatacagctcg
gtgaagtctttgattgaaacacagacagcttcagtgtccatcttcttctcattcgagtac
atgatacttgctacgacaacggtggctatgtttatgaaatacatattctatgtgagcgac
atgcttatggatgggcaatgggagaagaaggctgtgtgtactttctacctggagcttatc
cgagatttgctgcacctgtctatgtacctttgtttcttcatggttatatttgtgaactac
ggtgtgccgttgcatttgataagagagctttatgaaacattccgcaactttaagattcgc
attgccgattacattcgataccggaagataacttcaaatatgaatgaccgttttccagat
gcaaccccagaggaactggacacaagcgatgcaacctgcattatttgtcgtgaggaaatg
actactgccaagaaattgagatgtggacatttttttcacgtgcactgccttcgatcatgg
ttggaaagacaaaatacttgtccaacctgcagggctcttgttcttccacctgaaactggt
gcagttagtgctggagggcaacatggaccgcattctggtgtccaacagtctgcttctact
aatacttctggtcaagggtcaactagtggtactgttacagacagccccttgagtggtaat
caagcaagactgcaggcagctgcagctgctgctgcagtttatgagaaatcccttgtttac
ccgtccgcaaatacattagtgtgggcacctggatatgccgtacttccacaagttcatggt
gctatgcctggttcaagcaatgcaaattctgatgagggggttggtccagttggacaagtt
cagcatcaacaagtgatgtccagtgagcaaatgagttttccctatgtgcaggcacctcct
ttttctgtttcatctattcaagtacctggtactgatatgttgagagaggaaagcagtcat
ctttcagttgagtctcagaggaattttcttgagcatcaaattcagttgttacagagtcaa
ctagagtatctgcggaaacaacaggtggacaaaggtgctagctctagccattcagtatcc
acagttaccaatgtgacaactacagagtcatcttcagatgctacatctcacacaaatatc
caggaatcaaatttgtga
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