Chenopodium album (lamb's quarters): 145567117
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Entry
145567117 CDS
T11950
Symbol
LOC145567117
Name
(RefSeq) serine--tRNA ligase-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
145567117 (LOC145567117)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
calb01007
]
145567117 (LOC145567117)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calb03016
]
145567117 (LOC145567117)
Enzymes [BR:
calb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
145567117 (LOC145567117)
Amino acid related enzymes [BR:
calb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
145567117 (LOC145567117)
Transfer RNA biogenesis [BR:
calb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
145567117 (LOC145567117)
Prokaryotic type
145567117 (LOC145567117)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
YabA
HAUS5
Spc24
DUF7040
HDA2-3
Med9
TMF_TATA_bd
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
145567117
NCBI-ProteinID:
XP_081482483
LinkDB
All DBs
Position
11:1546570..1550796
Genome browser
AA seq
447 aa
AA seq
DB search
MLDINLFRVDKGGNPEIIRESQRRRFADVAIVDEVIALDQEWRRRQFELESLRKDFNRIN
KEVARLKIKGEDASEMIKSTDENKKSTAEKDAEVQEVKAALYAKLELIGNLIHDSVPVSN
DEANNAVIRTWGERRMEPKLKNHVDLVELLGIVDTKKGSNVAGARGFYLKGDGVLLNQAL
INFGLSFLSSKGYTPLMTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAFHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITSPNGND
SWDMHEEMLKNSEEFYQQLGLPYQIVAIVSGALNDAAAKKLDLEAWFPSSNQYRELVSCS
NCTDFQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTLCCILENYQKEDGVEIPEVL
RPFMYGKTFLPFQSKPAPEAKGKKSKA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatcaacctatttcgagtagataaaggaggaaaccctgaaatcattcgtgaa
tctcaacgtcgtcgtttcgcagatgtagccattgtcgacgaggttatcgccctcgatcaa
gaatggcgccgacgtcaatttgagctagagagcttgcgcaaggacttcaataggatcaac
aaagaggtggcacgcctgaaaattaaaggtgaggatgcatctgaaatgatcaaaagcaca
gacgagaataagaaatcaactgcagagaaagatgctgaagttcaggaagttaaggctgca
ttgtatgctaaattggaattgattgggaatctgattcacgattcagtcccagttagcaac
gatgaggcaaacaatgctgtgatccgaacgtggggtgaaaggcgaatggaaccaaagttg
aaaaatcatgttgaccttgttgagcttcttgggatagtagatacgaagaaaggctccaac
gttgctggtgctagaggtttttacttgaaaggtgatggcgtccttctgaatcaagctctg
ataaattttggtctcagttttctctcatcaaagggatatacaccgttaatgactccgttc
ttcatgcggaaagatatcatggcaaaatgtgctcagttagcccaatttgacgaagaactt
tacaaggtaactggtgagggagatgacaaatatttgattgccactgctgagcagccgctt
tgtgctttccacttggatgattggattcatccctcacaactcccaataagatatgctgga
tactcatcgtgcttccggaaagaagcaggttcacatgggcgagatactcttggaattttc
cgagttcatcagtttgagaaaattgaacaattttgcatcactagcccgaatggaaatgat
tcatgggatatgcacgaggaaatgttaaaaaattctgaagaattttatcagcagctggga
cttccttatcagattgtggctattgtttctggtgccctgaatgatgcagcagcaaagaag
cttgatttggaagcttggtttccttcatctaatcaatatagagagttggtgtcatgttca
aactgtacagacttccagtcaaggagactggagattcgatatggccagaaaaagagcaat
gaacaaacaaagcaatatgtccatctgttgaattcaactctgacagcaactgaaagaacc
ttgtgctgtattctggagaactaccagaaggaagatggagtcgaaatacccgaagtttta
agaccattcatgtatggaaagaccttcttgcctttccagagcaaacccgccccagaggcg
aagggaaagaagtctaaagcttaa
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