Chenopodium album (lamb's quarters): 145569100
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Entry
145569100 CDS
T11950
Symbol
LOC145569100
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03030
DNA replication
calb03410
Base excision repair
calb03420
Nucleotide excision repair
calb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145569100 (LOC145569100)
03410 Base excision repair
145569100 (LOC145569100)
03420 Nucleotide excision repair
145569100 (LOC145569100)
03430 Mismatch repair
145569100 (LOC145569100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calb03032
]
145569100 (LOC145569100)
03036 Chromosome and associated proteins [BR:
calb03036
]
145569100 (LOC145569100)
03400 DNA repair and recombination proteins [BR:
calb03400
]
145569100 (LOC145569100)
DNA replication proteins [BR:
calb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
145569100 (LOC145569100)
DNA Replication Termination Factors
ELG1-RFC complex
145569100 (LOC145569100)
Chromosome and associated proteins [BR:
calb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
145569100 (LOC145569100)
DNA repair and recombination proteins [BR:
calb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
145569100 (LOC145569100)
Check point factors
HRAD17(Rad24)-RFC complex
145569100 (LOC145569100)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
nSTAND_NTPase5
Mg_chelatase
AAA_lid_RFC1
Rad17
AAA_16
Viral_helicase1
RuvB_N
AAA_5
AAA_11
RCF1-5-like_lid
AAA_assoc_2
AAA_25
DNAX_ATPase_lid
ABC_tran
AAA_19
nSTAND3
AAA_24
AAA_28
IstB_IS21
AAA_30
RNA_helicase
AAA_18
DO-GTPase1
bpMoxR
NTPase_1
MeaB
AAA_29
Motif
Other DBs
NCBI-GeneID:
145569100
NCBI-ProteinID:
XP_081484593
LinkDB
All DBs
Position
11:complement(51182110..51185206)
Genome browser
AA seq
330 aa
AA seq
DB search
MASSSSNSGYEVPWVEKYRPNKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTT
SILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGRHKIVILDEAD
SMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCALVRFTRLSDQEILGRLMI
IIEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVK
NMIRNVLEGKFDDACSGMKGLYDMGYSPTDIITTLFRVVKNYDMAEYLKLEFMKETGFTH
MRICDGVGSYLQLCGLLAKLSLVRETAKAA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttcatcgaatagcgggtacgaggtaccatgggtggagaagtacagaccc
aacaaggtttccgacatcgtcggcaacgaagatgctgtttctcgcctccaagtcattgct
cgcgacggcaacatgcctaacctcatcctagccggtcccccgggtacaggaaaaacaaca
agcatactcgctcttgcacatgaacttttaggaccaaactgcaaggaaggagttctggag
ttaaatgcttcagatgataggggaattgatgttgtcaggaacaaaattaaaatgtttgcg
cagaagaaagttactctcccttctggacgacacaagatagttatattggatgaagctgac
agcatgacatctggagctcaacaagctttgagaaggacaatggaaatatactcaaacact
actcgctttgcgcttgcatgtaatacatcttcaaaaatcattgagccaattcagagtaga
tgtgcattggtccgatttacaaggttgtcagatcaagaaattcttggtcgtctcatgata
atcattgaggctgaacaggttccatatgttccagaaggtcttgaagctataattttcact
gctgatggtgatatgcggcaagctctgaataacttgcaggctaccttcagtggattccga
tttgtcaaccaggaaaatgtctttaaggtttgtgatcagcctcatcctttgcacgttaag
aacatgatccgaaatgtgcttgaaggaaagtttgatgatgcttgttctggtatgaaaggc
ctctatgatatgggttactcccctactgacataatcactacacttttccgtgttgttaaa
aactatgacatggccgagtatttgaagttggaattcatgaaggaaactgggtttacccat
atgagaatttgcgatggagttggctcctatcttcagctgtgcggacttctggctaagcta
tcacttgtcagggagacagccaaagcagcctga
DBGET
integrated database retrieval system
