Chenopodium album (lamb's quarters): 145570102
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Entry
145570102 CDS
T11950
Symbol
LOC145570102
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb04142
Lysosome biogenesis
calb04144
Endocytosis
calb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
145570102 (LOC145570102)
04142 Lysosome biogenesis
145570102 (LOC145570102)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
145570102 (LOC145570102)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
calb04131
]
145570102 (LOC145570102)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
calb04147
]
145570102 (LOC145570102)
Membrane trafficking [BR:
calb04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
145570102 (LOC145570102)
Exosome [BR:
calb04147
]
Exosomal proteins
Proteins found in most exosomes
145570102 (LOC145570102)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
RSRC1
Motif
Other DBs
NCBI-GeneID:
145570102
NCBI-ProteinID:
XP_081485220
LinkDB
All DBs
Position
12:4397345..4408702
Genome browser
AA seq
1703 aa
AA seq
DB search
MAAAANAPIVMKEVLTLPSVGIGSQFITFTHVTMESDKYICVRETSPQNSVVIIDMNMPN
QPLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEAKAKIKSHQMPEMVVFWKW
ITPKMLGLVTQTSVYHWSIEGDTEPVKMFERTANLANNQIINYRCDPSEKWLVLIGIAPG
APERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSTLIAFASKTSNAGQVT
SKLHVIELGAQAGKPGFSKKQADLFFPPDFADDFPVAMQISQKYGLIYVITKLGLLFVYD
LETASAVYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEASIVTFVSSQLNNLE
LAVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPV
QSGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDL
VKTVDTDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDP
QGAVNFALMMSQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGHLQTKVL
EINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYLQALKHYTELPDVKRVIVNTHA
IEPQALVEFFGTLSKEWALECMKDLLMVNLRGNLQIIVQVAKEYCEQLGIDGCIKLFEQF
KSYEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLME
AKLPDARPLINVCDRFGFVPDLTHYLYRNNMLRYIEGYVQKVNPANAPLVVGQLLDDECP
EDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSTDVHVHNALGKIIID
SNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELISVTAKNSLFKLQAR
YVVERMDGELWDKVLTPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELI
ELLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYINRLDNFDGPAVGEVAVEAQLY
EEAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAI
ESFIRAEDSTHFLEVIKASEDADVYHDLVKYLLMVREKVKEPKVDSELIYAYAKIDRLSE
IEEFILMPNVANLQLVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAAR
KANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEYYQNRGCFNELISLMES
GLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLY
IQYDEYDNAATTVMNHSPEAWDHMQFKDIIVKVANVEHYYKAVHFYLQEHPDLINDVLNV
LALRVDHTRVVDIMRKAGQLPLVKPYMVAVQSNNVSAVNEALNEIYLEEEDYDRLRESID
LHDNFDQIGLAQKVEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDSLYKDAMETASQSG
DRELAEELLVYFIEQGKKECFASCLFVCYDLIRADVALELAWLNNMIDFAFPYLLQFIRE
YMGKVDELIKAKLEAQKEVKAKEEEEKDMVAQQNMYAQLLPLALPAPPMPGMGGGAMGGG
YGPPPPMGTMGMPAFGMPPMGSY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccgctaatgctcctattgtcatgaaggaagttcttacgcttccaagcgta
ggaatcgggtcacagttcattactttcactcatgtaacgatggaatcagacaagtacatt
tgtgtgagagagacctcgcctcagaacagcgttgtaattattgacatgaacatgcctaat
cagcctttgaggcgtcccatcacggctgattctgctttgatgaaccctaactcaagaatt
cttgctcttaaagctcaacttccggggactactcaggatcaccttcagattttcaatatt
gaagcaaaagcaaagataaagtcccaccaaatgcctgagatggttgtcttctggaaatgg
attacccctaaaatgttgggccttgtaacacagacatcggtataccactggtcaattgaa
ggtgatacggagcctgtgaaaatgtttgagcggactgcaaatctggcaaacaatcaaata
atcaactaccgttgtgatccctcagagaaatggttggttttgatcggaatcgctcctggt
gctcctgagagaccacaattggttaagggaaacatgcagctgttttcagtggatcaacaa
cgtagtcaagctcttgaagctcatgcagcttcatttgctcaatttaaggttcctggaaat
gaaaatccttcgactcttattgcctttgccagcaagacctccaatgctggacaagttact
tcaaagttgcatgtcattgaacttggtgctcaggctgggaaacctggatttagtaagaaa
caagctgatctcttcttcccacctgattttgcggacgattttcctgttgcaatgcagata
tcccagaagtatggcttgatatatgttatcacaaagcttgggcttctgtttgtgtatgat
ttggaaacagctagtgcagtttacagaaacagaattagtcccgatccaatttttttgaca
tctgaagcttcatcagttggtggattttatgctatcaacagacgaggacaggtgttgtta
gccactgtaaacgaagcttcaattgtgacatttgttagtagccagcttaacaatttggag
cttgcagttaacctcgcaaaacgaggaaaccttcctggtgcagaaaacttggttgtccaa
cgattccaggaattatttgcccaaacgaagtacaaggaggcagctgagcttgctgctgaa
tctccccaaggaattttgcgtactcctgatactgttgccaagttccagagtgttcctgtt
caatctgggcaaacacctccattattgcagtactttggaacattgctaactagaggaaaa
ctcaatgcctttgaatcactggaactatctagactggttgttaatcagaacaaaaagaat
ttgttggagaattggttggcagaggacaagcttgaatgtagcgaggagcttggagatctt
gtgaagacagtcgatactgaccttgctctcaaaatatacattaaagctagggcgactcca
aaggttgttgcagcgtttgctgagaggagggaatttgataagattttgatatattccaag
caggttgggtacacacctgattatttgttcctcttgcaaacgattttgcgaactgatcca
cagggagctgttaattttgctttgatgatgtctcaaatggagggaggatgccctattgat
tacaatacaatcacagacctgtttcttcagagaaatttgattagagaggcaacagcattt
ttgcttgatgtgcttaagcccaatttaccagaacatggtcatctccaaactaaagttttg
gaaattaatcttgtgacatttcccaatgttgcggatgcaatcttagctaatggcatgttt
agccattatgatcgtcctcgaattgcacaactctgtgaaaaggctggcttgtatttgcag
gctttgaagcattacactgagttgccggatgtgaagcgtgtcatagtcaacacacatgct
attgagccacaggcacttgtagagttctttggaaccctttctaaggagtgggcccttgaa
tgcatgaaagatcttttgatggttaatctcagaggcaatttgcagataattgtgcaggtt
gccaaagaatattgtgagcagttgggtattgatggctgtataaagctttttgagcagttc
aaatcttatgaaggactatatttcttcttgggttcatacttgagctccagtgaagatcca
gaaatccatttcaagtacattgaagccgccgctaaaaccgggcaaattaaggaagtggag
cgggtaactcgtgaatcgaatttctatgatcctgaaaaaacgaagaatttcttgatggaa
gcaaagcttcccgatgctagacctttgataaacgtgtgtgaccggtttgggtttgttccg
gatcttacccactatctctacaggaacaacatgctccgttatattgaaggctatgttcag
aaggtcaaccctgccaatgctccgctagttgtcgggcagctgctagatgatgaatgtcct
gaagattttatcaaaggcctcattctctctgtgcgttctcttcttcctgttgagcctctc
gtggaggaatgtgagaagagaaatcggttacgcttgctcacacagttcttggagcacctt
gtcagtgaggggagcactgacgtgcatgttcacaacgctcttggtaaaattatcattgac
agcaataacaacccagagcattttctcacaaccaatccttactacgattcgcgtgttgtg
ggtaaatattgtgagaaaagggatcctactcttgctgttgttgcatataggcggggacaa
tgtgacgatgagcttattagtgttacagctaagaattctttattcaaattgcaggctaga
tatgttgtggaaagaatggacggtgaactctgggataaggtcctaactcctgaaaatgag
tacagaaggcaattgatagatcaagttgtttcaactgcattgccagagagtaagagcccc
gagcaggtttctgctgctgttaaggccttcatgactgctgatcttccccatgagctgatt
gagcttcttgaaaagatcgtccttcaaaactctgcattcagtggaaactttaatttgcaa
aatctacttatcttaactgctattaaggcagattcttctagagttatggattacatcaat
aggttggacaactttgatggacctgctgttggtgaagtggcagtggaagcccagttgtat
gaggaagcttttgcgatcttcaaaaaattcaacttaaatgtccaggctgtgaatgtgttg
cttgataatattcgcaacattgaccgagctgtagagtttgcattccgtgttgaagaggat
gctgtgtggagccaggttgcaaaggcccaactcagggaaggtctagtcagtgatgcaata
gagtcatttattcgggctgaggattcaacccatttcttggaagttatcaaagcttctgag
gatgcagatgtttaccatgacttggtgaagtatctgctgatggttagggagaaggttaag
gagcccaaggttgacagtgagcttatatatgcatatgcaaagattgatagactcagtgaa
attgaagagttcattttaatgcccaatgttgccaatcttcaacttgttggcgatcgccta
tatgatgaagctttatatgaagcggcaaagatcatatatgcattcatttccaactgggct
aagcttgctgtcactcttgtgaaattgaaacagttccaaggtgctgttgacgcagctcgc
aaggctaacagtgcaaagacatggaaggaagtttgttttgcctgtgtagatgctgaggaa
ttccgattggctcagatatgtggtcttaatgtcatcatacaggtggatgatctggaagag
gtcagtgaatactatcaaaacaggggatgctttaacgagctcatttcccttatggaaagt
ggtttgggactggaacgtgcacacatgggtatcttcaccgagttgggagttctctacgca
agataccgcccagagaagctcatggagcatatcaaattgttctctacccgtctcaacata
cccaagctgattagggcttgtgatgagcaacagcattggaaggagcttacttatttatac
attcaatatgatgagtatgacaatgctgccaccactgtgatgaatcattctccagaagca
tgggatcacatgcagtttaaagacattattgttaaggttgcaaatgtggagcattactac
aaggcagtgcacttctacttgcaggagcatcccgatctgattaatgatgtacttaatgtt
cttgcacttcgtgtggaccatacacgtgttgtggacatcatgagaaaggctggtcaactt
cctcttgtgaaaccatacatggtagctgtccaaagcaacaatgtatctgctgtgaatgaa
gcactgaatgaaatctatcttgaggaagaagactatgacaggcttcgtgagtccattgac
ttgcatgataactttgatcagattggtcttgcccagaaggtggagaaacacgagttgcta
gaaatgaggcgtattgcagcttatatatacaagaaggccggcagatggaagcaatccatc
gcattgtcaaagaaagacagtctttacaaggatgcgatggaaaccgcttctcagtcaggt
gatcgtgagcttgctgaggagttgcttgtgtactttattgagcagggaaagaaggaatgc
tttgcctcatgtctttttgtttgttacgatttgataagagccgatgttgcattggagctt
gcatggctaaacaatatgatcgactttgccttcccatatctcttacagtttattcgagag
tacatgggcaaagtggatgagttgattaaagctaaactcgaagctcaaaaagaggttaaa
gcaaaagaagaagaagagaaagacatggttgcacagcagaatatgtatgcacagctgctc
cctcttgctctaccagcaccaccaatgccaggaatgggaggaggtgcaatgggtggcgga
tatggtcctccacctcctatgggcaccatgggcatgcctgcttttggcatgccaccaatg
ggttcgtactaa
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integrated database retrieval system
