Chenopodium album (lamb's quarters): 145571895
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Entry
145571895 CDS
T11950
Symbol
LOC145571895
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb04136
Autophagy - other
calb04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
145571895 (LOC145571895)
04136 Autophagy - other
145571895 (LOC145571895)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
calb04131
]
145571895 (LOC145571895)
03029 Mitochondrial biogenesis [BR:
calb03029
]
145571895 (LOC145571895)
Membrane trafficking [BR:
calb04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
145571895 (LOC145571895)
Others
Specific organelles associated proteins
Auto phagosome
145571895 (LOC145571895)
Mitochondrial biogenesis [BR:
calb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
145571895 (LOC145571895)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML_2
WDR55
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_WDR41
ANAPC4_WD40
ATG16
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_Aladin
CFAP251_N
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
ASA1
WD40_RFWD3
Beta-prop_DCAF4
eIF2A
Beta-prop_EIPR1
WDR54
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_Vps41
PQQ_2
PEP5_VPS11_N
Beta-prop_RIG_1st
Small_EgtBD
FAM117
Rab11-FIP3
RE_LlaJI
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
145571895
NCBI-ProteinID:
XP_081487048
LinkDB
All DBs
Position
12:complement(9238595..9247581)
Genome browser
AA seq
512 aa
AA seq
DB search
MFKMLNEEVAIDAIKHALKALRKRHLAEEGAHAPAITAIARPLIHQGSEWKEKAENLELE
LQQCYKAQSRLSEQLVVEVAEGRSAKALIQEKETAVANLEKEVTQLSDENSELKKLLDEK
IKGEELLTSENQELKKQLDEMSMKAKNAEAENKMLVDRWMLQKMQDAERLNEANSLYEDM
LQQLKASSIQQIARQQVDGVVRQSEEGAEFFVESTIPTTCKNRIHAHDGGCASILFEYNS
NKLITGGQDRSIKMWDTSTGSLSHTLYGCLGSVLDLTVTNDNKTVIAASSSNNLYVWDVS
SGRIRHTLTGHTDKVCAVDVSKVSNRHVVSAAYDRTIKAWDLQKGYCTNTIIFPSNCNAV
CFSMDGRTICSGHVDGNLRLWDIQTGKLLSEVAAHSLAVTSISLSRNGNTILTSGRDNVH
NLFDIRTLEVYNTLRASGNRVASNWSRSCISADDNYVAAGSADGSVHIWSIQKGDIVSTL
KEHGSSVLCCAWSGLGKPLATSDKNGVICTWV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatgttgaatgaagaagttgccattgatgcaattaagcatgctttgaaagcg
cttcggaagcggcatttggcggaagaaggtgctcatgctccggcgattaccgctattgct
agacctctaattcatcagggctcagaatggaaagagaaagctgaaaatttggagcttgaa
cttcagcaatgttacaaagctcaatctcgactatctgagcagcttgtggttgaagttgct
gagggacggtctgccaaagctttgattcaagagaaagaaactgctgtagctaacttggaa
aaggaggttactcagctcagcgatgagaactctgagttgaagaaactgttagatgagaag
attaagggtgaagaattgctgacaagtgagaaccaagagctgaaaaaacaacttgatgag
atgagtatgaaagcaaaaaatgctgaagctgagaataagatgttggttgatcgttggatg
ctccagaaaatgcaagacgctgagcgtcttaatgaggcaaattctctttatgaagacatg
cttcaacaacttaaggccagcagcatacaacaaattgctcgccaacaagttgatggtgta
gttcgtcaaagtgaggaaggcgccgagttttttgtggaatcaaccattcctacaacttgc
aagaatagaatacatgctcatgatggtggctgtgcttccatattgtttgagtacaattcc
aacaaactgatcactggaggacaggatcgttctattaagatgtgggatacaagcacagga
tcattaagtcacactctttatggttgcttaggttctgttcttgatctcactgtcacaaat
gataataaaactgtaatagctgccagtagctcaaataacttgtatgtttgggatgtcagc
tcgggccgaatccgacatacacttacaggacatactgataaagtctgtgcagtagatgtg
agcaaagtatccaaccgacacgtcgtcagtgcagcatacgatcgaactataaaagcttgg
gatttgcagaaaggttattgcactaatacaatcatttttccaagcaattgcaacgctgtt
tgtttcagtatggatggaagaacaatatgctcaggtcatgttgatggcaatctccggctt
tgggacatacagacagggaagcttctaagtgaagttgctgctcattctcttgctgtgaca
tcaatctctttgtctcgaaatggaaacacaattttgaccagtgggagagataatgtgcat
aatctgtttgatataagaacacttgaggtttacaataccttaagagcaagtggaaacaga
gtggcatctaattggagcagatcctgtattagtgccgatgacaattatgttgctgctgga
tctgcggatggatctgtacatatctggtcaatacagaagggagatatagtcagcactctc
aaggaacatggatcttctgttttgtgctgtgcttggagtggtctaggaaagcctttggca
acttctgacaagaatggagttatttgcacttgggtgtga
DBGET
integrated database retrieval system
