Chenopodium album (lamb's quarters): 145572095
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Entry
145572095 CDS
T11950
Symbol
LOC145572095
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03030
DNA replication
calb03410
Base excision repair
calb03420
Nucleotide excision repair
calb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145572095 (LOC145572095)
03410 Base excision repair
145572095 (LOC145572095)
03420 Nucleotide excision repair
145572095 (LOC145572095)
03430 Mismatch repair
145572095 (LOC145572095)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calb03032
]
145572095 (LOC145572095)
03036 Chromosome and associated proteins [BR:
calb03036
]
145572095 (LOC145572095)
03400 DNA repair and recombination proteins [BR:
calb03400
]
145572095 (LOC145572095)
DNA replication proteins [BR:
calb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
145572095 (LOC145572095)
DNA Replication Termination Factors
ELG1-RFC complex
145572095 (LOC145572095)
Chromosome and associated proteins [BR:
calb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
145572095 (LOC145572095)
DNA repair and recombination proteins [BR:
calb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
145572095 (LOC145572095)
Check point factors
HRAD17(Rad24)-RFC complex
145572095 (LOC145572095)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
Mg_chelatase
AAA_11
AAA_assoc_2
AAA_5
SLFN-g3_helicase
nSTAND3
AAA_14
ResIII
AAA_2
AAA_24
nSTAND_NTPase5
PhoH
AAA_19
AAA_28
AAA_7
DNAX_ATPase_lid
AAA_30
DUF815
RNA_helicase
AAA_25
NPHP3_N
Parvo_NS1
bpMoxR
ATPase_2
TIP49
NB-ARC
AAA_18
Motif
Other DBs
NCBI-GeneID:
145572095
NCBI-ProteinID:
XP_081487245
LinkDB
All DBs
Position
12:14333404..14343705
Genome browser
AA seq
340 aa
AA seq
DB search
MAPLIQSSQPWVEKYRPKQVKDVAHQDEVIRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSAQRAGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEGIMK
SRILHICGEEGINLDSQALTTLSSISQGDLRRAITYLQGAARLYGSSISSKDLISVSGVI
PEEVVQDLLAACKSGNFDLADKAVNNVISEGYPVSQMISQLFDIIVEADDLSDEHKAKIF
KKLGETDKCLVDGADEYLQLLDVAGNIMRAFCNMAQDFSN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattgatacagagctctcaaccttgggttgaaaaatatcggccgaagcaagtg
aaggatgttgcacaccaagatgaagtcattcgagttcttaccaacaccctcgaaaccacc
aattgtcctcatatgctattctatggtccacctggtaccggaaaaaccaccacagctctt
gccattgctcatcagctttttggacccgaactttacaagtctagggtgcttgagttgaat
gctagtgatgatcgtggcatcaatgttgttcgtaccaaaataaaaaattttgctgcggtt
gctgtaggttctgcacaacgagcagggggttatccttgcccaccttataaaattatcatt
ctagacgaggcagattccatgacagaagatgctcagaatgcattgcgtcgaacaatggaa
acttactccaaagttacaagattctttttcatctgtaattatattagcaggatcatagag
cctctggcttcaaggtgtgctaagtttagatttaaaccacttccggaaggcataatgaaa
agtcgaattttgcatatatgtggagaagaaggcatcaatctggattctcaggcacttact
acgttgagttccatttcacaaggtgatcttcgtcgggccattacatacttgcagggagct
gctcgcctatatggatcatccatatcctccaaggacttaattagtgtgtccggggtcata
ccagaggaagttgtgcaggatttgttggctgcttgcaagagtggtaactttgatttggct
gacaaagcagtgaataatgtcatttcagaaggctatccagtttcccagatgatctctcag
ttatttgatatcatcgtggaagctgatgatttgtcagatgagcacaaggcaaagattttc
aaaaaattaggtgaaacagacaagtgtcttgttgatggagcagatgagtatttgcagttg
ctagatgttgctggtaacatcatgcgcgccttctgtaacatggctcaagatttctccaat
tag
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