Chenopodium album (lamb's quarters): 145574093
Help
Entry
145574093 CDS
T11950
Symbol
LOC145574093
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
calb
Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
calb03021
]
145574093 (LOC145574093)
Transcription machinery [BR:
calb03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
145574093 (LOC145574093)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
145574093
NCBI-ProteinID:
XP_081487957
LinkDB
All DBs
Position
13:complement(252908..281230)
Genome browser
AA seq
1956 aa
AA seq
DB search
MWTNIFRIGGLHQLSWFQFLPNESDVTCLPDKSSRTEQRDAATLELISSHVQLQKDGFLS
TWTNSFVGPWDPSQGTHNPDEKIKLWLFLPGRHSSVSDTAQPAVCRLRVVASGLWISPGD
SEEVATALSQALKSRLERALIGLSYVRYGDVFSRYRPFSQSEELFRKGQPTIEFVFAASE
DAIFVHAILSAKHVRTLSGGDMEKVLKLSSSSFGQRLSVVVSPHGMCGKVTGCCSSDLVK
QVFVGPGASNTSTGLVGLPYTAAHTSGGKLGGQNYYLEVTLGCSSSGSEKVNLPNSNINC
SNRPTSPSIAKGSQKVSTGDASNFEKTFIYPSEAVLVPILQTSYARSFLKRFWLPNWMGL
SLAGSTLLMHCCGSETDDVDDSWSESDGISLQHNLHSSSNSNNSSISSISSSSSDSDCRA
KATSGDLEGDADSLTGRQSGLSSVDPMDTNGPKQGAKRPRTGADDSYIQAGTVGNVPKHE
YSNSGIPGVTDDHVGSEWDWDDDDRGGGMDIQALLSEFGDFGDFFENDALPFGEPPGTAE
SQALVYSGQDCGDGGGSPSGTLMDVHDPMLLPASFQMFESLHSPSTGMEECVSNIQEATK
CNSAGLVSCAPAASNGEIDHVLKAEALLTFAPEYGAVETPSSELSSTVFRSPYQPKSQKA
ESLNSSGSNYVYGATPPSSPGTNGREENPSLAADSRIHPGKHDIGSDLQKLYTQIERGQT
LIETMSIKNSTVTSSEGASLSLFSGFNSSSTVKSVQDMTNEVANSAKQFFLSQRTVPSVE
LECLVFQVFMCRIRHTLLPFGNPASTAGNRSIGNMGLGQLPGDPSGTPDNFPSKSELRKK
DSIPVRIAGDFDGGMLDSPFNAPIGVWRSVGTSKPAKPAITPTAEVFPSSSQQIYNEEAM
ISYRKRQPLQDFLDAMPLLVQQAASFVDVAFDGEYVDGPYSWLALQEQCRRGFCCGPHMA
HAGCGGILASCHSFDIAGVDLLDPVSADVQASSVISLLQSDVKTALKSAFGSSDGPLFVT
DWCKGRSLSADAGTTSEGLSAESTLSEYRDSSITTALSVSDPVSPSQSTAGMPSGLRDGS
KGDDTGHKRSNQELCMSESEPQLRSRRRPSLLVIPSTSILVGYQDDWLKTSASSLQLWEK
APLEPYAFQKHVSYYAICPNIDSLTMMAADFFQELGSVYEMCKLGSHSPHAVGNQMDVDS
GKCLTSGFVLLDIPQSVKVESTNASGIGIGIGSISDFYQSLSSSWDIASYLRSLAKALKT
LQLVSCSATNAKDGNNSSCTVIYVVCPFPDPTAVLKTIVESSVAVASVFFSTENDKRAIL
HSQVGKALNHAAGVDEATISNIPTLSGFSIPRIVLQIVPIDAIFRVSSPSLNELVLFKEI
AFTVYNKARRILRGSSNEFIQSSTLSGRSSSMLVNMANPIPGMWKDCVGSRFSGSSLSRE
GEFDPGMRAGTWDNSWQTARAGGLSCDANRSGDALFQEQAHYMFEPLFILAEPGSEEHGV
SPTPIGNVATDDSSGGFVQNSTLCGDTVPSSQLDGSEGDSYVSVLLRSSPSLHCCYGWTE
DWCWLVCIWTDSRGELLDNHIFPFGGISSRQDTKGMQNIFVQVLQQGCQLLQACATPDNG
VARARDFVITRIGCFYELECQEWQKALYSIGGSEVKKWPLQLRRTTPDGMPTNSNGASLQ
QQEIERSLPSSPNPLYSPHSKSSGFMKTTSRKQLIGGPAVDGSRGSLQWVQSISFVSVSV
DHSLHLVSQADVSTGSSQGSGITGSLNYVEGFTPVRSLGSTSASYILIPSPSMHFLTPFP
LQLPTCLTSESPPLAHLLHSKGYAIPLSTGFVVSKAVPTLKKDINKIKEEWPSVLSVSLV
DFYGGCGVPTEKLGRALPKQAGRGIISDVREYELEIHSILESVMAELHGLSWLTVSPAYL
ERRTALPFHCDMVLRLRRLLYFAEKEISGLPERPQL
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaacattttcagaatcggaggccttcatcagctatcttggttccagtttctg
ccaaatgaatcagatgttacctgtttacctgataaaagctcaaggactgaacagagggat
gctgctacacttgaacttatctcatcacatgttcagctgcagaaggatggatttctcagc
acttggactaactcctttgtgggcccttgggatccttctcagggcacgcacaaccctgat
gaaaaaattaagctctggctttttcttcctggccgccattcctctgtttctgacactgct
caacctgctgtatgtagattaagagttgttgcttctggactctggatttctccgggtgat
tctgaggaggttgcaactgctttgtctcaggctctaaaaagccgtttagagagagcactt
attggactctcatatgtgagatatggtgatgtgttttcaagatatcgacccttttcacaa
agtgaagaactctttaggaaaggccaaccaactattgaatttgtctttgctgctagtgaa
gatgccatctttgtgcatgctatattatcagcaaagcatgtacggacactttctggtggt
gatatggagaaagtattgaagctctcttctagtagctttggccagagactttcagttgtg
gtctctcctcatggaatgtgtggcaaggttactgggtgctgttcaagtgatcttgtgaag
caggtgtttgtcgggcctggtgcatcaaacacttcaactggattagttggtttaccatat
actgctgctcacacgtctggtggcaagttgggggggcagaattactacttagaagttacc
cttggttgcagttcttctggaagtgagaaggtgaatttgcctaattcaaatatcaactgc
tccaatcgcccaacatccccctctattgctaaaggcagtcagaaggtgtccactggcgat
gcttctaattttgaaaagactttcatatatccatctgaggcggttcttgttccaattttg
caaacatcatatgcaagatcttttttgaaaagattttggctaccaaattggatggggctg
tcgttggctggttcaactctcttgatgcattgctgcggttctgagacagacgacgtggat
gattcatggtctgaatctgatggtatcagcttgcagcataatttacacagtagcagcaac
agcaataatagtagtatcagtagcataagcagcagctcaagtgatagtgattgtagagcc
aaggcaacgtctggtgaccttgaaggtgatgctgattccttaactggaagacagtcaggc
ctatcttctgttgatcccatggatactaatggccctaaacagggtgcaaaacgtcctcgt
acaggagcagatgattcatacattcaagccggtactgtgggaaatgttcctaaacacgaa
tacagcaattcaggcatccctggagtcacagatgatcatgttgggtctgagtgggactgg
gatgatgatgacagaggtgggggcatggatatacaagccctgctctccgagtttggtgat
tttggtgacttttttgaaaatgatgcattgccatttggagagcccccaggaactgcagaa
tctcaggcacttgtgtattctgggcaagattgtggagatggaggtggcagtccttctggt
accctaatggatgttcacgatccaatgcttttacctgcaagtttccaaatgtttgaaagc
cttcactctccttcaacagggatggaagagtgtgttagtaatattcaagaagccacaaaa
tgtaactcagctggtcttgtgagctgtgcaccagcagcttcaaatggtgaaattgatcat
gtattgaaagctgaagcattattgacttttgccccagaatatggagcagttgagacccct
tcaagtgagctctcctcaactgtttttagaagtccgtaccaaccaaaatctcagaaagct
gagagtttgaattcaagtggtagcaattatgtttatggggcaacaccaccttcatctcct
ggcactaatggacgtgaagaaaatccttctctggctgctgactccagaatacatcctggc
aaacatgatattggttctgatctccaaaaattatacactcagatagagagaggtcaaact
ctaatagaaacaatgtctattaagaacagtactgtaacttcttctgaaggggcatcatta
tcgttgttttctgggttcaactcttctagtactgtcaaatctgttcaggatatgactaat
gaagttgctaatagtgccaagcaattctttctatctcaacgaacagtcccttctgttgaa
cttgagtgccttgtgttccaggtctttatgtgcaggataagacatacattattgcctttt
ggtaatcctgcttctactgccggcaacagatccattggcaacatggggttgggacaattg
cctggtgatccgagtggcacacctgacaattttcctagtaaatctgaactgaggaagaag
gattccataccagttagaattgctggtgattttgatggagggatgcttgatagccctttt
aatgcacccattggggtttggcgctctgtcgggacgtctaaacctgcaaagcctgcaatt
acacctactgctgaggtttttccttcctcatctcagcaaatatataatgaggaagcaatg
atttcatatcggaaaagacagccacttcaagactttcttgatgccatgccattgcttgtc
cagcaagctgcctcgtttgttgatgttgcatttgatggtgaatatgttgatggtccatac
agctggcttgcattacaagagcagtgtaggcggggattttgttgcgggccacatatggct
catgcgggttgtggtggcattttagcttcttgccattcttttgatattgctggtgtagat
ctgcttgatcctgtgtcggctgatgttcaggcatcatcagtgataagtttgctgcaatct
gatgtcaaaacagctttgaaatctgcatttggctcctcagatggacctttatttgttact
gattggtgcaaaggccgatcactttcagcagatgcaggaactacaagcgaaggattatct
gctgaatctactttaagtgaatatagggattcatctattactacagcactatctgtgagc
gacccagtgagtccgtcccaatccactgctggtatgccatctggtttgagagatgggagt
aaaggggatgacactggtcataaaaggtctaaccaggagctctgcatgtcagagtcagag
ccacagctgcggtcacggaggagaccttctctgcttgtgattccatctacttctatactt
gttgggtaccaagatgattggctgaagacatcagcaagctctttacagttatgggaaaag
gctccgcttgagccgtatgcttttcaaaaacatgtgtcttattatgctatctgtccaaat
atcgattcccttactatgatggctgctgatttttttcaagaacttggaagtgtttatgag
atgtgcaaattggggagccattcaccgcatgctgttggaaatcaaatggatgtagactca
gggaagtgtttaacttctggttttgttctccttgatatcccccaatcagtgaaggtagaa
agcaccaatgcttctggtatcggtattggtattgggtcaataagtgacttttatcagtct
ttatcaagtagttgggatattgcaagctatcttaggtctcttgcaaaagctcttaaaact
ttacaacttgtgtcgtgttcggctacaaatgcaaaagatggaaataatagttcctgtact
gtgatctatgttgtgtgcccgtttcctgatccaactgctgttctcaaaaccattgttgaa
tcttcagttgctgttgcgtcagtatttttctcaacagagaatgacaaaagagccattttg
catagtcaggtggggaaagctttaaaccacgcagctggtgttgatgaagcgaccatatca
aatattcccacgctttctgggttcagtattccaaggatagtcctgcaaattgttcccata
gatgctatctttcgagtttcaagtccgagtctcaatgaacttgttttgttcaaagagata
gcttttactgtttacaacaaagctaggcgtatattacgaggatcatccaatgaatttatc
cagtcatcaaccctctctggtagatcttcatccatgctggtgaacatggctaatccgatt
ccgggtatgtggaaagactgtgtcggttctcgtttttcgggttcgtccttatcaagagaa
ggtgagtttgatcctggtatgagagctggaacttgggataattcatggcagactgcaagg
gccgggggactaagttgtgatgcaaaccggagtggagatgctttatttcaagagcaggct
cattacatgtttgaaccactttttattttggctgaaccaggctcagaggagcatggagta
tcacctacacccattggtaatgtggctacagatgatagcagtggaggatttgtgcaaaat
tcaacactttgtggggatacagtacccagctcccaacttgatggatctgaaggagatagt
tatgtatctgtccttctgagatcgtccccaagcttgcattgttgctatggttggactgaa
gattggtgttggctggtgtgcatctggactgattctaggggggaactgctggataatcat
atatttccgtttggtggtattagtagtagacaggatacaaaaggcatgcagaacattttc
gtccaagttcttcaacaaggttgccagctactgcaggcctgtgccactcctgataatggt
gtggcaagagcaagagattttgtcattacacggattgggtgcttttacgagctagaatgc
caagaatggcaaaaggcactctattcgattggcgggtcagaagtaaagaaatggccattg
caattacgccgaaccactccagatggtatgccgacaaacagtaacggagcttccctgcag
cagcaggaaattgaaagaagcttaccttcatccccaaatccattgtatagtcctcactca
aaatcttctggctttatgaaaactactagtagaaagcagcttattggcgggcctgcagtt
gatggctcaagaggatcactgcagtgggttcagagcatcagctttgtttcagtttccgtt
gaccattctttacaccttgtctctcaagctgatgtctctactgggagcagtcaaggtagt
ggcattacaggttcattgaattacgttgaaggatttacccctgttagatctcttggttct
acatcagcatcttacattttgatcccttctcctagtatgcatttcctcactcccttccct
cttcagcttccaacatgcctgacctctgaatcccctcctctggctcatctccttcacagt
aaaggttatgcaattccactttcaacaggttttgttgtctccaaagctgttcccacactt
aaaaaagatatcaacaaaataaaggaagaatggccttcagttctttcagttagtcttgtt
gatttctatggtggttgtggcgttcctactgaaaaattgggcagagcactccctaagcaa
gcaggaaggggaattatttctgatgtcagggagtatgagcttgagattcattcgattctt
gagtctgttatggctgaacttcatggcttatcttggttgacagtgagtccagcatatctg
gagagacgtactgcactacccttccattgtgacatggtgttaagactgagaaggctgcta
tattttgctgagaaggaaatctctggtctgccagaaaggccacaactataa
DBGET
integrated database retrieval system
