KEGG   Chenopodium album (lamb's quarters): 145578993
Entry
145578993         CDS       T11950                                 
Symbol
LOC145578993
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
calb  Chenopodium album (lamb's quarters)
Pathway
calb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:calb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    145578993 (LOC145578993)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:calb03019]
    145578993 (LOC145578993)
   03036 Chromosome and associated proteins [BR:calb03036]
    145578993 (LOC145578993)
Messenger RNA biogenesis [BR:calb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     145578993 (LOC145578993)
Chromosome and associated proteins [BR:calb03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    145578993 (LOC145578993)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_NOL10_N Beta-prop_Aladin WD40_RFWD3 Beta-prop_HPS5 Beta-prop_IFT140_1st DSE1_N Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_WDR75_1st Beta-prop_RSE1_2nd ASA1 Beta-prop_VPS8 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 145578993
NCBI-ProteinID: XP_081492410
LinkDB
Position
14:15241283..15247537
AA seq 351 aa
MSNFTSLTNLGQNPNPNKSYEVPQPPADSISSLNFSPKANHLIVTSWDNQVRCWEIMQSG
ANVNSTPKAAISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIR
EMAWIPEMNVLVTGSWDKTLRYWDLRQQTPVHTQQLPERCYSLTARHPLLVVGTADRNLV
VFNLQNPQAEFKRIMSPLKYQTRCLAAFPDKQGFLVGSIEGRVGVHHLDDAQQSKNFTFK
CHREGNEIYSVNSLNFHPVHGTFATAGSDGGFNFWDKDSKQRLKAMSRCSQPITCSAFNS
DGSIFAYSSCYDWSKGAENHNPATAKSYIYLHLPQESEVKGKPRVGSTGRR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgtcgaattttacatctcttacgaatttgggtcaaaacccaaatcccaacaaatcatat
gaggtgcctcaaccaccagctgattcaatttctagccttaatttcagtcccaaggccaat
catcttatagttacttcatgggataatcaggtgcgttgttgggagataatgcaaagcgga
gcaaatgtcaatagtacaccaaaggctgccatatctcatgatcagccggtattgtgctcg
gcttggaaggatgatggaacaactgtcttctcaggaggctgtgacaaacaggtgaagatg
tggcctttgctgtctggtgggcaaccaattactgtggctatgcatgatgctccaattaga
gagatggcctggattcctgagatgaatgttctggttactgggagctgggataaaacgctt
aggtactgggacttgaggcaacaaactcccgtccatactcaacaactcccagagcgctgc
tattctttaacagcacggcatcctcttttggttgttggaacagcggatagaaatctcgta
gtgttcaatttgcagaaccctcaggctgaattcaaaaggataatgtcaccactgaaatac
cagacaaggtgtcttgctgcttttcctgataaacaaggattcctggttggatcaattgag
ggacgagtaggagttcatcaccttgatgatgcacaacaatccaagaacttcactttcaaa
tgtcacagagagggcaatgagatttattctgtcaactctttgaactttcaccctgtacac
ggcacctttgcaactgcaggatctgatggtggttttaatttctgggacaaagacagtaaa
cagagactgaaggcaatgtcaagatgcagtcaaccaataacttgtagtgcattcaacagt
gatggatctatatttgcatactcgtcatgttacgactggagtaaaggtgctgagaaccat
aacccagcaacagccaagtcttacatatatttacacttaccacaggagtctgaggtgaaa
gggaagcccagagttggcagcactggccgacgatga

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