Chenopodium album (lamb's quarters): 145584580
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Entry
145584580 CDS
T11950
Symbol
LOC145584580
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
calb Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calb03016
]
145584580 (LOC145584580)
Enzymes [BR:
calb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
145584580 (LOC145584580)
Transfer RNA biogenesis [BR:
calb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
145584580 (LOC145584580)
Prokaryotic type
145584580 (LOC145584580)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
145584580
NCBI-ProteinID:
XP_081497523
LinkDB
All DBs
Position
16:1010127..1015825
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AA seq
823 aa
AA seq
DB search
MKRNKQMKVYRQEESQSSNAYVQILGTGMDTHDTLPSILLFFDNFRIIFNAGEGLQRFCA
EHKIKLSKIDYICLSRVCSETVGGLPGLLLTLAGIGEGHSVKLRGPSNLKPLVHALKSFI
PHASICAERFGVNLSSDAQSPTASSLPEGPFFVCGSAAVKVSAVLLQPCTSEDSSLKPSD
VSVVYICELAEIKGKFHNEKAEALGLNPGPKRRELKNGKSVKSDRLDIMVHPSDVIDPSI
QGPVVLIVDCPTESHAGKLFITQSLGKYYANLSGETLETVNCVVHLTPASVVQTINYQNW
MKNFGSVQHVMAGYSMKNMNIPILKSSARITNQLSYLCPQFFPAPALQSHEHQNVEMGME
PIKWICDSVLAENLLKFTLLPHSQLGLDKSNVPDLIPSSQVISDLLLESPEIVEAARQIS
QFWCEPIVVAKRDPTKDREGLIGDLSLDQSPLPGCLENIRRDDAEIVLLGTCSSQPSKYR
NVSSIFVNLFAKGNLLLDCGEGTLAQLKRRYGVEGAADAVKNLRCIWISHIHADHHAGLV
RILALRRDLLKGTPHEPLHVIGPKYLESFLNKYKDLEDIDMQFLDCRSTSEASWDTFEHG
PVLTNCQTFSSDCTKDEHVNDENEEDGCLQRCSKRQKTNIYVDNCVDYGLQKSLSEVLKE
MGLERLISFPVVHCPESFGVILKARERVNNDGALIPGWKVVYSGDTRPCTEVIQAAEAAT
LLIHEATFEDDLVEEAIARNHSTSKEAMEVGSSAGAYRIILTHFSQRYPKIPSISSEINL
EKASIAFDLMSVNLADLPILPRILPYLKLLFKDDITQKLECDV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaacaagcagatgaaagtgtatcgtcaagaagagtcccagtcctccaatgcc
tatgtgcagattttaggaactggtatggatactcatgacacactgccttcaattctgctc
ttctttgataatttccggattatatttaatgctggagagggattacaacgattctgtgca
gagcataagattaagctatcaaagatagattatatatgtctttctcgtgtttgctcggag
acagttggtggacttccagggctgcttctaactttggctggcattggagaaggacattct
gtcaagttacggggtccatcaaatctcaaaccattggttcatgcactcaagtccttcatt
ccccatgcttccatatgtgcggagaggtttggagtcaatctgtcttcagatgctcaatct
cctactgcttcaagcctgcctgaaggtcctttctttgtttgtggaagtgcagctgtcaaa
gtttcagcagttctcttacaaccatgtacttctgaagattcctcactaaaacctagtgat
gtgtctgttgtctacatctgtgagttggccgaaattaaagggaagttccacaatgagaaa
gctgaagcccttggtctaaaccctggacccaagcgcagagaacttaaaaacgggaaatct
gtcaagtcagatcgcttagatatcatggttcaccccagtgatgtgatagacccttcaatc
caaggccctgttgtactcatagttgactgcccaactgaatctcatgcaggaaagctattt
atcacccaatctctgggtaaatactatgcaaatctttcaggtgaaacacttgaaactgtg
aattgtgtagtccatcttactcctgcttctgttgtacaaactataaattatcagaactgg
atgaagaattttggctcagtacaacatgttatggctggatattcaatgaagaacatgaat
ataccgattctaaaatctagtgctaggatcacaaaccagctaagttacctgtgtcctcag
tttttcccagctcctgccttacagtctcatgagcatcaaaatgttgaaatgggcatggag
cctattaaatggatctgtgatagtgtattagcagaaaatcttctcaagttcactttactt
cctcactctcaactaggcttggataaatcaaatgttccggatttgataccctcttcacaa
gtcattagtgatttactgctggagagtccagaaattgtagaagctgcccggcaaatcagc
cagttctggtgtgagcccatagtcgtggccaaaagggatcccactaaagatagagaagga
ttgattggagatctatcattggatcaaagtcctcttcctggttgtttagagaatataagg
agagatgatgcagaaattgtgctgctaggaacatgctcatcccagccatctaaatatcgc
aatgttagctctatctttgttaatcttttcgccaaaggtaacttgctcctagattgtggt
gaaggaacgctggctcaactgaaaagaagatatggcgtggaaggtgctgctgatgctgta
aaaaacctaagatgcatttggatttcacatatccatgctgatcatcatgctggtttggtg
aggatacttgctctgcgtcgtgatttgttgaagggaacccctcatgaaccattacatgtc
attgggcccaagtaccttgaatcattcctgaataaatacaaagatctggaagatatagat
atgcagttccttgactgcagaagcacctctgaagcctcatgggacacgttcgagcatggt
cctgtgttgacaaattgccaaactttttcatctgattgcacgaaagatgagcatgtgaac
gatgaaaatgaggaggatggatgtttgcagaggtgctctaagagacagaaaacaaatatt
tatgtggataattgtgtagattatggtttacaaaagagcttgagtgaagttttgaaagaa
atggggctggaaagattgataagttttcctgttgtgcattgtcctgagtcatttggtgtt
atattgaaagcaagggaaagagtcaataatgatggagctttgattccagggtggaaggtt
gtctactctggtgacactaggccatgcactgaagtaatacaggcagctgaagcagcgact
cttcttatacacgaggcgacttttgaagatgaccttgtggaggaggcaatagcccgaaat
cacagcacctctaaagaagccatggaggtggggagctctgctggtgcatatcgcatcatt
cttacacacttcagtcaacggtatcctaaaattccttcaattagcagtgagatcaacttg
gaaaaagctagcattgcttttgatctcatgagtgtaaacttggcagacttgcctatactc
cctcgcattcttccatatttaaaattactgtttaaagatgatattactcaaaaactagaa
tgtgatgtatag
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