Chenopodium album (lamb's quarters): 145584628
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Entry
145584628 CDS
T11950
Symbol
LOC145584628
Name
(RefSeq) crossover junction endonuclease MUS81-like
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03440
Homologous recombination
calb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
145584628 (LOC145584628)
03460 Fanconi anemia pathway
145584628 (LOC145584628)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calb03400
]
145584628 (LOC145584628)
DNA repair and recombination proteins [BR:
calb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
145584628 (LOC145584628)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
Hus1
PHP
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
145584628
NCBI-ProteinID:
XP_081497571
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All DBs
Position
16:1987412..1999748
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AA seq
555 aa
AA seq
DB search
MAIEKRPVCEENDALVAYMRKWRTERMENNPQAHTQNIEKTVKKALTSVCDHKTPITTLK
EFKAIKGIGKWLANEMQEFFNSNSSASQDDNLAKGGKKAKAPKRYIPQKNSVAYALLIFL
HRATTNGKEFMHKQELIDAAEASGLSRVPIAPEAGRGKQKQFGSSPRDWYSGWSAMTTLV
DKNLVYKNSCPAKYMLSDKGREVALECLSRSGMLDSAANVSNTEEASISDDEEEIMELVA
TVSPTSPHLNKGMKDDIPLEFLERDSQGKKASQPACQTSPVDLRLPPLEVLQKFEDTYEI
VLILDDREHFAKTKSRNLKEKIFEEYKIQIEVRHLPVGDAIWIARHKKDSTEYVLDFIVE
RKNVDDLRSSIRDNRYKDQKLRLQRTGMKKIIYLVEGDPNACEEADSIKTACFTTEILEG
FDVQRTTSLVDTLHRYGCLTLAITDHYKLISSAEGCKTAGVCPKYNKFIKTCEDADKLTV
SDVFAIQLMQVPQVTEEVAMAILECYPTLFSLAHAYAALDKDKDIVAQQELLMKKSEGAV
SAVASRNIYRFVWED
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgagaagagaccagtgtgtgaagagaacgacgcgctggttgcatacatgcga
aaatggcggacagaaaggatggagaataatccccaagctcatacccaaaatattgagaaa
actgttaaaaaagctctcactagtgtttgtgatcataaaacccccatcactactctcaag
gaattcaaagcaattaagggtattgggaagtggcttgcgaatgagatgcaagaatttttc
aacagtaattctagtgcttctcaggatgataatttggcgaaaggaggtaagaaggctaaa
gcccccaaaaggtatataccgcagaaaaactctgttgcttatgcattgttgatcttttta
catagggcaactactaatggaaaagaatttatgcataagcaagagctgattgatgcagct
gaagctagtggtctctcacgagttccaatagcgccagaagctggcagaggtaagcagaag
caatttggtagttcccctagggattggtatagtggatggagtgcaatgacgacattggtt
gacaaaaatcttgtatataagaacagttgtccggcaaaatatatgttatctgacaagggt
cgtgaagtagcgctcgagtgtttgtctcgatcaggtatgcttgattctgctgcaaatgtt
agcaacacagaagaagcttcaatttcagatgacgaagaagagattatggagcttgtagct
actgtttcacccacatctcctcatctgaacaagggcatgaaagatgatattcctttggag
tttcttgagagggattctcagggaaaaaaggctagtcaacctgcttgccaaaccagtcca
gttgatcttagactgccaccacttgaagtattgcagaagttcgaagatacatacgaaatt
gtcttgattttggatgaccgagaacactttgccaagacaaagtcaagaaatcttaaagaa
aagatctttgaggaatataaaattcaaatagaggtcagacatttgcccgttggagatgct
atctggattgcacgtcataaaaaagattccactgaatatgttcttgatttcattgttgag
aggaaaaatgttgatgacctacgtagttcaataagagataaccgctacaaggatcagaag
ttgagacttcagagaactggaatgaagaagattatatatttggtggaaggtgatcctaat
gcttgtgaagaagctgatagcattaaaactgcttgctttactacagagatcttggagggg
tttgatgtgcaaagaacaacaagcctggttgatactcttcaccgatatggctgtttaact
ctggcaattactgatcactataaactgatttcatcagctgaaggatgcaaaacagcgggt
gtttgtcctaagtataacaagtttatcaaaacatgtgaagatgctgataagttgacagtt
agtgatgtttttgccatacagctcatgcaggttcctcaggtgactgaggaggttgccatg
gctatcttggaatgttatcctactctcttctctcttgctcatgcatatgctgctttagat
aaggataaggatattgttgcgcagcaggagttgctgatgaagaaaagtgagggtgcagtc
agtgctgttgctagtagaaatatctaccgctttgtatgggaagattag
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