Chenopodium album (lamb's quarters): 145585535
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Entry
145585535 CDS
T11950
Symbol
LOC145585535
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
145585535 (LOC145585535)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
calb03021
]
145585535 (LOC145585535)
03036 Chromosome and associated proteins [BR:
calb03036
]
145585535 (LOC145585535)
Transcription machinery [BR:
calb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
145585535 (LOC145585535)
Coactivators
SAGA/TFTC/STAGA complex
145585535 (LOC145585535)
Chromosome and associated proteins [BR:
calb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
145585535 (LOC145585535)
STAGA complex
145585535 (LOC145585535)
TFTC complex
145585535 (LOC145585535)
SAGA complex
145585535 (LOC145585535)
SLIK complex
145585535 (LOC145585535)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
145585535
NCBI-ProteinID:
XP_081498361
LinkDB
All DBs
Position
16:44880006..44888314
Genome browser
AA seq
671 aa
AA seq
DB search
MDVELIDKRVLEYLQKKGFKQTEIAFQEEQQQQQQQSKNSSSNSHTDPDVAKLILNFTSE
SESLPAQYHDGYSKLRSWAHNSLDLYKHELLRVLYPVFIHCFMDLVARGHLQEARNFFIT
FREDHETMHQRDLQKLEGVLSPSHLEEMEFAHTLRQSKVNIKICQYSYELLLQYLHNTRS
ITMLGVINEHINFQVCPGQPGSISDDADAVTLVDGGQDAANLINQKEIQWGMLEDSIEDR
LEKGGGLLLDSEKVDAENKEGENEENKKKSADGGKQGASVKKSKKDKVGGTGKTARPEAN
TPMAPRVKPELPLPAIPIEVEHSILEDLRNRVQLSSVALPSVSFYTFMNTHNSLNCASIS
HDGSLVAGGFSDSSLKVWDMSQLGQQTSTSALQGEKDAAGNEQMVGTNGVKRPYTLFQGH
SGPVYSASFSPLGDFILSSSADSTVRLWSTKLNANLVCYKGHNYPIWDVQFSPYGHYFAS
CSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHVNCNYIATGSSDKTVRLWDIQSGECV
RIFIGHRSMILSLAMSPDGRYMASGDEDGAIMMWDLASGRCITPLVGHTSCVWSLAFSGE
GSLLASGSADCTVKLWDINASTKTLRSEEKTGSSNRLRSLRTLPTKSTPVYSLMFSRRNL
LFGAGVLSKRS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagaattgatagataaaagagtgttagagtatttgcagaagaaaggtttcaag
caaactgaaatcgcttttcaagaagaacaacaacaacagcagcaacaatcgaagaattct
tcgtcgaattctcatactgacccagatgtcgctaagctcatcctcaactttacttccgag
tcagagagccttcctgcacaatatcatgatgggtacagtaagcttagatcatgggctcac
aattccttagatttatacaagcatgaattgcttcgagtactttatccagtatttatacat
tgtttcatggatcttgttgcaaggggccatctacaagaagcccgtaatttcttcattacc
ttccgcgaagatcatgaaactatgcatcaaagagatctgcagaagctcgaaggagttctg
tcaccctctcatttggaggagatggagtttgcccacactttaaggcagagcaaagtaaac
atcaagatctgtcagtactcgtacgagcttctcctccagtatctgcataacactcggtct
attacaatgcttggagttataaatgagcatatcaacttccaagtttgccctggtcagccc
ggttcaatatcagatgacgctgacgcggtgactctggttgatggtggccaagatgcagca
aatttaataaatcaaaaagaaatccagtgggggatgctggaagattcgattgaagaccgc
ttggagaagggtggaggattgctcttagactctgaaaaggtagatgcggaaaacaaggaa
ggggagaatgaagaaaataagaaaaaatctgctgacggaggaaagcaaggtgcatcagta
aaaaagtccaaaaaagataaagttggaggcactggaaaaactgctcgtccagaagccaac
actcctatggcaccaagagtcaaaccagagcttcctttgcctgcaataccaattgaagtt
gaacattctatcctggaagaccttcgtaatcgtgtgcagttgagtagtgtggccctgcca
tctgtaagcttctacacatttatgaatacacacaatagtttaaactgtgcatcaatttca
catgatggatccttggttgctggtggattttccgactcttctttaaaggtctgggacatg
tcacagcttgggcaacaaacgagcacttctgctctacagggtgaaaaagatgcagctgga
aatgaacaaatggttggtacaaatggtgttaaaagaccctatactttgtttcagggtcat
tctggccctgtttattctgcttcgtttagcccccttggggattttatactctcttcttca
gcagattcaactgtgcggctttggagcacaaaactaaatgccaatcttgtttgctacaag
ggtcataattatcctatatgggatgtgcagttcagcccctatggtcactattttgctagc
tgttctcatgatagaacggcaaggatctggtccatggacagaatacagcctctaagaatc
atggctgggcatttatcagatgttgattgtgtccggtggcatgtaaactgtaattacata
gctactggatctagtgataaaacagttcgattatgggacattcaaagtggggagtgtgtc
aggatatttattggtcacaggagtatgatattgtccttggcaatgtcacctgatggtcgg
tatatggcatctggtgatgaagacggtgcaatcatgatgtgggatcttgctagtggacgt
tgcattacccctttggtgggtcacacatcatgtgtatggtcacttgctttcagtggtgaa
ggctcacttcttgcctccggatcagctgactgcacagttaaactgtgggatatcaatgca
agcacaaagacattgagatctgaggaaaaaactgggagttcaaacagacttcggtcgttg
aggactcttcctaccaaatcaacaccagtttactctctgatgttttcaagaaggaatctg
ctatttggtgctggggttctttctaaacgttcatga
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