Chenopodium album (lamb's quarters): 145585702
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Entry
145585702 CDS
T11950
Symbol
LOC145585702
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
145585702 (LOC145585702)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
calb03019
]
145585702 (LOC145585702)
Messenger RNA biogenesis [BR:
calb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
145585702 (LOC145585702)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
145585702
NCBI-ProteinID:
XP_081498538
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All DBs
Position
16:complement(47477082..47482411)
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AA seq
202 aa
AA seq
DB search
MVAASSSVVAVYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYFKEGMRTSVEGILLVQE
HNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLSSKLGANSTAHQPNWQIGECVAN
WWRPNFETVMYPYCPPHITKPKECKKLFMVHLPEREYFAVPKNLKLLAVPLFELYDNVQR
YGPVISTIPQQLSRFQFNMISP
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgcgtcgtcgtcagtggtggccgtatacccactatcaagctacacctttggc
accaaagaacccaagcttgaaaaagatacctctgttgccgatcgtcttgctcgtatgaaa
gtcaattactttaaagaaggcatgaggaccagtgtggaaggcattctactcgtccaagag
cataatcatccgcacattcttctattacaaattggaaacactttctgcaaacttcctggt
ggtcgtttgaagcctggtgaaaatgaaattgatggtttaaagagaaaactttccagcaaa
ctcggtgctaactcgactgctcatcaacctaattggcagattggtgagtgtgttgctaac
tggtggaggccaaattttgaaacagtgatgtatccctactgccctcctcacatcacaaaa
cctaaggaatgtaaaaagcttttcatggtccacttgccagagcgagaatactttgctgta
ccaaaaaatcttaagttgttggccgtgcccctcttcgagctttatgacaatgttcagaga
tatggaccagtgatctccaccatccctcagcaattgtcaagatttcaattcaacatgatc
tctccatga
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