Chenopodium album (lamb's quarters): 145586046
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Entry
145586046 CDS
T11950
Symbol
LOC145586046
Name
(RefSeq) uncharacterized protein LOC145586046
KO
K12874
intron-binding protein aquarius
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145586046 (LOC145586046)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
calb03041
]
145586046 (LOC145586046)
Spliceosome [BR:
calb03041
]
Complex B
Other components
Prp19-related factors
145586046 (LOC145586046)
Complex C
145586046 (LOC145586046)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD-helicase
ResIII
AAA_22
UvrD_C_2
SLFN-g3_helicase
AAA
Parvo_NS1
AAA_16
Motif
Other DBs
NCBI-GeneID:
145586046
NCBI-ProteinID:
XP_081498888
LinkDB
All DBs
Position
16:2208128..2221355
Genome browser
AA seq
1545 aa
AA seq
DB search
MTKVYGTGTYDFKRHRVAEYPVEITHQIAVEKTPDSIPISNAPNSISLSEINRDPLTKIA
ADNWIKSGVNDSNPRKPFDAELVNDIYRKELLVKSGRKPVPLQRVMILEISQYLENYLWP
YFDSETASFEHVMSMILMINEKFRENVAAWVCFHDRKDVFKAFLERVLRLKDQGERFTIA
EKTNYLVFMINVFQSLEDEVVSDTALRLASLQCWHSLSYGRFQMELCLNPDLIKKWKKMT
KAEAKKAKKRGENFDPSKSLEATFLRSLIVEFLGVLDSEVFFSTQHDDSERISTNGLQEV
DDACVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALFTHVRGKLFSQLVD
LLQFYETFEINDHEGTQLTDDEVVQAHYDRFQSFQLLAFKKVPKLRELALANVGAIHKRV
DLSKKLSVLLPNELKDLVCSKLKLISSNDPWSDRVDFLIEIMVSFFEKQKSQKEAINALP
LYPNEQIMWDESLVPNINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDI
QEAVPHLLAYINNEGETAFRGWSRMAVPIREFRISEVKQPNIGEVKPAAVTAKVTYSISS
YRSHIRSEWDGLKEHDVLFLLSIRPSFEPLSTEEASKATVPQRLGLHCVRGCEVIEIRDE
EGGLMNDFTGKIKRDEWKPPKGELRTVTVALDAAQYHMDVTDIAEKGAEDVYGTFNILMR
RKPKENNFKAILESIRDLMNETCIVPDWLHNIFLGYGNPSAAQWTNMPDLLETVDFKDTF
LDANHLKDSFSNYQISFINPDGSENLHPEPPFQIKLPKTLKSNVQALPGNKSNITASSDG
DVNAIQERLIVETYIPPDPGPYPQDKPKQNTVRFTPTQVGAIISGVQPGLTMVVGPPGTG
KTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELAT
DLDFSRQGRVNAMLVRRLELLNEVERLARSLQLPEDVGYTCETAGYFWLLHVYSRWEQFL
AACSDNKDKPTFVQDRFPFKEFFSDAPQPIFTGKSFDKDMRAAKGCFRHLKTVFQELEEC
RAFELLKSTVDRANYLMTKQAKIVAMTCTHAALKRKDFLQIGFKYDNLLMEESAQILEIE
TFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYI
ELNAQGRARPSIAKLYNWRYRELGDLPYVKEETIFNRANAGFSYDYQLVDVPDYNGKGES
APSPWFYQNEGEAEYIVSVYIYMRLLGYPANKISILTTYNGQKFLIRDVISRRCVPYDII
GPPNKVTTVDKFQGQQNDFILLSLVRSRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFE
QCYELQPTFQRLLQRPDHLALNLTENMPFTDRHVEDTGPAYLVSGVEEMANIVNYKRHQV
DQARMMSLQYNSVNFEQGDLSMGEPTQNGQEDLTSVNDMKTEGSVLENGKSGQVLSVNNS
KESTVMEEDKIGQNGDVQVENPEARVTENAVTDGDADLAASNMEE
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagtatatggaactgggacctacgatttcaaacgccatagagtggcggaatac
ccagttgaaattacccatcaaattgctgttgaaaaaacccctgattcaatcccaatttca
aatgcccccaattcaattagtctttctgaaattaatcgagaccctcttactaaaattgct
gctgataattggatcaaatctggtgtaaatgattccaaccccagaaaaccctttgatgct
gagcttgtcaatgatatttatcgcaaggagttgctcgtgaaatcgggccgaaaaccggtg
ccgttgcaaagggttatgattttggagattagtcagtatttggagaattatctttggcct
tattttgattctgaaactgctagttttgagcatgttatgtctatgatactcatgattaat
gagaagttcagagagaatgtagcagcttgggtgtgttttcatgacaggaaagatgtgttc
aaggcattcttggagcgggttcttcggcttaaggatcagggggaacgctttactattgcg
gagaagaccaactacttggttttcatgattaatgtctttcagagtttggaggatgaagtt
gtcagtgataccgctttaagactggcgagtctgcaatgctggcatagcttgtcatatggc
cgttttcagatggagctttgtctaaaccctgatttaataaagaaatggaaaaagatgact
aaggcagaagccaagaaggctaagaagcggggagaaaattttgatccatcaaaatctctg
gaagcaacattcttgagaagtctcatcgtggagttcttgggggtattggattctgaggtg
tttttctccacacagcatgatgattcagaaagaattagtacgaatggtttacaagaagtt
gatgatgcttgtgtcttgtactgtgagaggtttatggagttccttattgatttactaagc
caactgccaacaaggagatacttgaggcctttggtggctgatgttgcagttgttgccaaa
tgtcacttgagtgcactttttactcatgtaagaggaaagctgttttcacaactggttgac
ttgttacaattctatgaaacatttgagatcaatgatcacgaagggactcaactgactgat
gatgaggtcgttcaagcacattatgatcgctttcaatcctttcaattgcttgcttttaag
aaagttcccaagttgcgggagctggctttagcgaatgttggtgcaatacacaagcgagtt
gatctttctaagaaactttctgttcttttgcctaatgagctcaaagacctagtgtgttct
aagctcaaactcatttcaagcaatgatccatggtcagacagggttgattttctaattgaa
attatggtatccttttttgagaaacaaaagtctcagaaggaagccataaatgctcttcca
ctctacccaaatgagcaaattatgtgggatgaaagtcttgtacctaacattaactactct
ggagaaggatgcctggctctccctaaacttaatttgcagtttttgacccttcatgattat
ttattgagaaattttaatcttttccgtctggagtctacgtatgaaatccgggaggatatt
caggaagctgtgccgcaccttcttgcctatatcaataatgaaggggaaacagctttccgt
ggttggtcgagaatggccgtacccattagggaattcaggattagtgaggtgaagcagcct
aacattggggaagtaaaaccagcagcagttactgcaaaagttacttacagcatttccagt
tatagatcacacataagatctgaatgggatggattaaaagagcatgatgttttattttta
ctttctatacggccttcatttgagccattgagcacagaggaagcatctaaggcaactgtt
cctcaacgacttgggcttcattgtgtacgtggatgtgaagtgatagagatccgggatgag
gaaggaggtctgatgaatgattttactggaaaaattaaacgtgacgagtggaagcctccc
aagggtgaattgagaactgtaactgttgcactagacgcagcacagtaccacatggatgtc
acagatattgcagagaaaggagctgaagatgtgtatggaacttttaacattttaatgcgg
agaaaaccaaaggaaaataatttcaaggccattttagaatctattagagatcttatgaat
gaaacgtgtatagttcctgattggttgcacaacatatttttgggttatgggaatccttca
gctgctcagtggactaacatgcctgatcttttggagactgtagattttaaggatactttt
ctggatgcaaatcatttgaaggacagtttttcaaattatcagatttctttcattaatcct
gatggttcagagaacttgcatccggagcctccatttcaaattaagcttccaaagacgctg
aaaagcaatgttcaagctctccctggcaacaaatctaatataactgcttccagtgatggt
gatgtcaatgcaattcaagaaaggctcattgttgagacatatattcctcctgatccaggt
ccatacccccaagacaagccaaaacagaacacagtcagatttacccctactcaggtcggg
gcaattatctctggtgttcagccaggcttgactatggtagtaggtccacctggtactgga
aagactgatacagctgtgcagatcctaaatgttctatatcacaattgtccttcccagaga
actttaattataacacactccaatcaggctctgaatgatctttttgaaaagataatggag
agagatgtacccgctcgttatcttcttcgattaggacaaggtgaacaggaattagcaact
gatctggacttcagtcgtcaaggtcgtgttaatgcaatgcttgtgcgacgtttggaactg
cttaatgaggtggagaggttagcgcgatctcttcagcttcctgaagatgtaggctatact
tgtgaaacagctgggtacttttggctgcttcatgtctactcacgttgggaacaatttcta
gctgcctgttctgataataaagataaaccaacatttgttcaggaccgtttcccatttaaa
gagtttttttctgatgcccctcagccaatctttactggaaagtcctttgataaagatatg
cgggctgccaaaggatgttttcgccatctcaaaaccgtgtttcaggagcttgaagagtgt
agggcatttgaattgctgaaatcaactgtggatagagctaactacctaatgactaagcag
gcaaaaattgttgctatgacttgcacacatgcagctctcaagagaaaagatttccttcag
attggatttaaatatgacaacctattgatggaagaaagtgcacaaatcctggaaattgaa
acttttattccaatgttgctgcagagacaggaagatggttatgcacgtcttaaacgttgc
atattaattggtgatcatcaccagctgcctccagttgtaaaaaacatggcctttcagaag
tatagccacatggatcaaagtctttttactcgttttgttcgtctaggcattccctatatt
gagcttaatgctcagggtcgagcacgaccaagcatagctaaactttacaactggaggtat
agagagctgggagaccttccctatgtaaaggaagaaactatttttaatagagcaaatgct
gggttttcttatgattatcagttagtggatgtgccggattataatggcaaaggtgaaagt
gctccttcaccctggttttatcagaatgagggagaggctgaatacattgttagcgtttac
atatacatgcgcctgttgggttatcctgcaaataagatatccatcttaactacttataac
ggacaaaaattcctcattcgtgatgttatcagtagaagatgtgttccatacgacattatt
ggccccccaaacaaggtcacaactgtggataagtttcaaggtcagcagaatgattttatc
ttactgtcgctggtgcgtagtcgatttgtgggtcacttgcgcgatgtgagaagattggtt
gtggcaatgtctcgtgcaagactcggcctctatgttttctgccgccgttcattgtttgag
cagtgctatgaactacaacctacttttcagcgtcttctacagagacctgatcaccttgct
ttaaacttgacggagaacatgcctttcacagatcgtcatgttgaggatacaggtccagcc
tatcttgtcagtggtgtggaagagatggctaatattgtgaactacaaaagacatcaggtt
gaccaggcaaggatgatgagccttcaatataattcagttaatttcgaacaaggagatctg
tctatgggtgaacccacccagaatggacaggaagacttaacctcagtgaatgacatgaag
acagaaggatctgtcttggaaaatggtaaatcagggcaagtcctgtctgtaaataactct
aaggaaagtacagttatggaagaagataagattggtcaaaacggagatgtgcaagtagag
aatcctgaggctcgtgtaacagaaaacgctgtaacagatggtgatgctgatcttgctgcc
tccaatatggaggagtaa
DBGET
integrated database retrieval system
