KEGG   Chenopodium album (lamb's quarters): 145586767
Entry
145586767         CDS       T11950                                 
Symbol
LOC145586767
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
calb  Chenopodium album (lamb's quarters)
Pathway
calb03020  RNA polymerase
calb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:calb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    145586767 (LOC145586767)
  09124 Replication and repair
   03420 Nucleotide excision repair
    145586767 (LOC145586767)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:calb03021]
    145586767 (LOC145586767)
   03400 DNA repair and recombination proteins [BR:calb03400]
    145586767 (LOC145586767)
Transcription machinery [BR:calb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     145586767 (LOC145586767)
  RNA polymerase III system
   RNA polymerase III
     145586767 (LOC145586767)
  RNA polymerase I system
   RNA polymerase I
     145586767 (LOC145586767)
DNA repair and recombination proteins [BR:calb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      145586767 (LOC145586767)
SSDB
Motif
Pfam: RNA_pol_Rpb6 Merozoite_SPAM
Other DBs
NCBI-GeneID: 145586767
NCBI-ProteinID: XP_081499809
LinkDB
Position
16:complement(47295435..47299184)
AA seq 142 aa
MADDDYNDIDMGYEEEPPEPEIEEGEEEETLQPDDDLNDPLIEGEDREGEAKEKQQRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGD
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggacgatgattacaatgacattgatatggggtatgaggaagagcccccagagcct
gaaattgaggaaggggaggaagaagagactttacagccagatgacgacttgaatgatcct
cttatagaaggtgaagacagagaaggggaggcaaaagagaagcagcagaggaagacatct
aaatacatgacaaaatatgagcgagctagaattctggggacacgtgcacttcagatcagt
atgaatgccccggtcatggttgaattggaaggtgaaactgacccactcgagattgctatg
aaggaactgcgacaacgcaagataccatttactattcgtcgttacttgcctgatggaagt
tatgaagactggggagtggatgaattaattgtcgaagattcttggaaaaggcaggtggga
ggtgactga

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