Chenopodium album (lamb's quarters): 145589628
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Entry
145589628 CDS
T11950
Symbol
LOC145589628
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03015
mRNA surveillance pathway
calb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
145589628 (LOC145589628)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
145589628 (LOC145589628)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
calb01009
]
145589628 (LOC145589628)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
calb03019
]
145589628 (LOC145589628)
03036 Chromosome and associated proteins [BR:
calb03036
]
145589628 (LOC145589628)
Protein phosphatases and associated proteins [BR:
calb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
145589628 (LOC145589628)
Messenger RNA biogenesis [BR:
calb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
145589628 (LOC145589628)
Chromosome and associated proteins [BR:
calb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
145589628 (LOC145589628)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
145589628
NCBI-ProteinID:
XP_081502415
LinkDB
All DBs
Position
17:complement(37122682..37132097)
Genome browser
AA seq
523 aa
AA seq
DB search
MNGGDVGAGVVGGGETSGVGPPPSPLDWKFSQVFGERAAGEEVQEVDIISAIEFDKTGDH
LATGDRGGRVVLFERTDTKDHGIGRRDMERMDYPISRHPEFRYKTEFQSHEPEFDYLKSL
EIEEKINKIRWCQTANSALFLLSTNDKTIKFWKVQEKKVKKIADMNMDPSKTPGNNSSGS
SSSVPPSPKPYVVNGGYPDKLPNSLNNESFPPGGISSLRLPVVVTSNETSLVARCRRVYA
HAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPQNMEDLTEVITSAE
FHPSHCNTLAYSSSKGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKF
AKDGRHILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGD
GQRVATGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGS
ESPGVDSNGNSFDFTTKLLHLTWHPSENSIACAAANSLYMYYA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcgatgtaggtgccggagttgttggtggtggtgaaacttccggcgtcgga
ccaccgccatctccgttggactggaaattctctcaggtcttcggtgaaagggcagctggt
gaagaagttcaggaagttgatatcatttcagctatagagttcgataaaactggagaccat
ttagctactggtgaccgtgggggcagggtggttttatttgagagaacagacacaaaggat
catggcattggtagaagggatatggagaggatggactatccaattagtaggcatccagag
tttcgttataaaactgagtttcagagtcatgagcctgagttcgactacttgaagagtttg
gaaatagaggagaaaatcaacaaaatcagatggtgccaaactgctaacagtgctttgttt
cttttgtctacaaatgataagaccattaagttttggaaggttcaagaaaagaaggtaaag
aagatagctgacatgaatatggacccttccaaaactccagggaataatagttctggttct
agttcaagtgttccacccagtcccaagccgtatgttgtgaatggaggatatcctgacaaa
ttgcctaattctttgaataatgagtccttcccacctggagggatctcatctctgcgttta
ccagtggtagtcaccagcaatgagactagccttgttgctagatgtcggagagtatatgct
catgctcatgactatcacattaattctatttcgaataacagtgatggagagacttttata
tcagcagatgatttgcgaataaacctttggaacttggagataagcaatcagagtttcaat
attgttgatgtaaagccccaaaacatggaggatctgactgaggttattacatcagctgag
tttcacccatcccattgtaatacattggcatatagtagctcaaaaggatcaatccgcctc
attgacttgcggcaatcagcactatgtgatagtcacgcaaaattatttgaggaacaagaa
gcgcctggttcaagatccttttttacagagataattgcttccatttcagatattaaattt
gcaaaagatgggaggcatatacttagtcgtgattacatgactcttaagttatgggatatc
aatatggattcaggtcctgtagcaacctttcaggtccatgaatatttaagacccaagctg
tgtgatttgtatgaaaatgattctatttttgataaatttgagtgttgtctgagtggtgat
gggcagcgagtggcaactggttcttacagcaatcttttccgcgtgtttggttgtgctcct
ggaagcacagaagccacaactttggaggccagcaaaaatcccatgaggagacaagtgcaa
accccatcaagaccctccaggtcgttgagcagcataacacgtgttgttagacgaggatct
gagagtcctggtgttgattcaaatggaaattctttcgacttcaccactaagttgcttcat
ctaacttggcatccatcagaaaactcaattgcttgtgccgcggcaaatagcttgtacatg
tattatgcataa
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