Chenopodium album (lamb's quarters): 145589679
Help
Entry
145589679 CDS
T11950
Symbol
LOC145589679
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
calb Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calb03016
]
145589679 (LOC145589679)
Enzymes [BR:
calb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
145589679 (LOC145589679)
Transfer RNA biogenesis [BR:
calb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
145589679 (LOC145589679)
Prokaryotic type
145589679 (LOC145589679)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
145589679
NCBI-ProteinID:
XP_081502484
LinkDB
All DBs
Position
17:complement(40064345..40072480)
Genome browser
AA seq
940 aa
AA seq
DB search
MSQITTLRLLINHSPPIFSPLFFKPRNLHLPIRRFSLFTAFSSLPKKQTNLQSSPAKPLK
YKNRNKSSLPEKKEGEEGAKMAETESSGFNKRRAMGKDKDDKPKNLQLKVRKLNPVNTIC
YVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRYCTEHRIKLSKIDHIFLSRVCSE
TAGGLPGLLLTLAGIGEEGICVNMWGPSNLRQLVAAMKAFIPNAAMVHTRSFGPLQDPDK
AVSDLSKFSGPILLINDEVVKLSAILLQPNEDKESINNESETTIKPRDLSVVYICELPEI
QGKFDPEKAKALGLRAGPKYRELQQGKPVKSDHRDIMVHPSDVMEPPIPGPIVFLVDCPT
ASHLQNLLSVDSLNKFYTEFSGNLSENTRAVACVIHLSPSSVASSPAYQNWMKRFGDAQH
IMAGHERKNAEIPVLKSSAKIAARLNYLCPRFFPAPGFWSLDTDDISLNSTFSTKDPQTT
IAAENLLKFNLRPYANLGLDRSSVPPYTGPAQVLDDLRAEISEIDNTVQQVRQLWDSPVE
VNREISLENNNSVVEEPWFDELGLPSCLQDITREDMEIVLLGTGSSQPSKYRNVSSIFIN
LFTKGSLLFDCGEGTLGQLKRRFGIEGADNAVRNLRCIWISHIHADHHTGLARILALRRD
LLKGVPHEPLLVVGPGQLMRFLNAYQKLEELDMQFLDCRHTTQASWDAFASSLNSDLGSS
SPTNSGSNVDSTLFIKGSPMQSYWKRPSSPVGNADSMERLSHLRKVLQDAGLETLISFPV
VHCPQAFGIVLKAGDRINNVGEVIPGWKVVYSGDTRPCKELIEASHGATVLIHEATFEDA
LMDEAVARNHSTTKEAIEVGEAAGVYRIILTHFSQRYPKIPVFEDAHMHNTCIGFDMMSI
NMADLPVLPRILPHLRLLFRTEMGVDEADDLLPEAVSAAS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaatcacaactctccgcctcctaattaaccattctcctccaatcttctcacct
cttttcttcaaacccagaaatcttcatcttccaatcaggcgtttctctctcttcactgcc
ttttcatcattacccaagaaacaaacgaatttgcaatcttctcctgcaaaaccccttaaa
tacaagaatagaaataagagttctttgcctgagaaaaaggagggagaagaaggtgcaaaa
atggcggaaactgagtcttctgggtttaataagaggagggcaatgggcaaagataaagat
gataagcccaagaatcttcaactcaaagttagaaaacttaatcctgttaatactatctgc
tatgttcagattctgggaactggaatggatactcaagatacatctccttcagtcttgctt
ttttttgacaagcaaaggtttatttttaatgccggagagggtttgcagcgttattgtaca
gagcacaggattaagctttcaaagatagatcacatatttctgtctcgagtctgctcagaa
actgctggaggacttccaggtcttttgttgactttggctggaataggggaagaaggaata
tgtgtcaacatgtggggcccttcaaatctcaggcaattggttgcggcaatgaaggctttc
attccaaatgctgccatggtccacactcgtagctttggtcccttgcaggaccctgataaa
gcagtgtctgatttgtcaaaattttcaggacccattttacttatcaatgatgaggtggtt
aaattatcagctattctcttgcaaccaaacgaggataaggaaagtataaacaatgaatca
gaaacaactataaaacctagagatctttctgtagtctatatttgtgagctacccgaaatt
caggggaagtttgatcctgaaaaggctaaggcacttggactgagagctggaccaaagtat
cgggaactgcagcaaggaaaaccagtgaaatcagatcatcgtgatattatggttcatcct
tctgacgtgatggaacctcctattcctggacctattgtatttcttgttgattgtccaaca
gcttctcatttacagaatttattgtcagtggattctctcaataagttctacacagagttc
tctggtaatttgtctgaaaataccagggcagtggcttgtgtaattcatttaagtccatct
tctgttgctagtagtcctgcttatcaaaattggatgaagagatttggtgatgcccagcac
atcatggctggacatgaacggaaaaatgctgaaatacctgtcctaaaatcaagtgctaag
attgcagcaagacttaattacttgtgtcctcggttcttccctgctcctgggttttggtct
cttgacacagacgatatttcattgaactctactttttcaactaaggaccctcaaaccacc
attgctgctgagaatcttcttaagttcaatttgcgtccatatgcaaacctcggtttggac
agatcatcagtccctccttatactggacccgctcaagttttagatgacttacgcgccgaa
atttctgagattgacaatacagtgcagcaagttaggcaattgtgggatagtcctgtggaa
gttaaccgagaaatttcattagaaaataacaattctgttgtggaagagccatggtttgat
gagcttggtctgcccagttgtttgcaagatataacccgagaggatatggagattgtcctt
ctgggcactggatcatcccagccttccaagtaccgtaacgtgagctctatcttcatcaat
cttttcacaaaagggagtttgctttttgattgtggtgaaggcacattgggtcagttgaag
agaagatttggtatagaaggtgcagataatgctgtgagaaatttgaggtgcatatggatt
tctcatattcatgctgaccatcatacaggactagcaagaattcttgctctacgtcgtgat
ttattgaaaggagttcctcatgaacctttgttggttgtgggcccaggacagctgatgaga
tttctaaatgcatatcaaaaacttgaagagctagatatgcaatttcttgattgcaggcat
acaactcaagcctcttgggatgcctttgccagttctctcaactcagatctagggtcatca
tctcctactaattctggaagtaatgttgattctacactctttattaagggaagcccaatg
cagagctattggaagagacctagtagcccagttggaaatgctgattccatggagagactt
tcacacttgaggaaagtgctgcaagatgcggggctagagactttgataagtttccctgtt
gtgcactgcccacaagcttttggcattgtcctgaaggcaggtgacagaatcaacaatgtt
ggtgaagtgataccaggatggaaagtggtgtactctggggacacaaggccttgtaaggag
ctgatagaagcatctcatggtgcgactgtcctaatacatgaggcaacctttgaggacgcc
ttgatggatgaggctgtggctagaaaccatagcactacaaaagaagccattgaagtgggt
gaagcagctggcgtatatcgcataattcttacacacttcagccaacggtacccaaagatt
cctgtgtttgaagatgcccacatgcataatacgtgtataggctttgacatgatgagcatc
aacatggccgacttgcctgttcttcctaggattcttcctcacctcagacttctcttcaga
actgaaatgggtgttgatgaagcagatgatcttcttcctgaggcagtcagtgcagcttct
tag
DBGET
integrated database retrieval system
