Chenopodium album (lamb's quarters): 145591237
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Entry
145591237 CDS
T11950
Symbol
LOC145591237
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
calb
Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
calb03036
]
145591237 (LOC145591237)
Chromosome and associated proteins [BR:
calb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
145591237 (LOC145591237)
REST complex
145591237 (LOC145591237)
Heterochromatin formation proteins
Other heterochromatin formation proteins
145591237 (LOC145591237)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
EF-hand_13
Motif
Other DBs
NCBI-GeneID:
145591237
NCBI-ProteinID:
XP_081503766
LinkDB
All DBs
Position
18:complement(4293851..4306445)
Genome browser
AA seq
1365 aa
AA seq
DB search
MKRLRDESFAGSQFKRPFGASRGESYGQPQNNGGSGGIGQKLTTDDALQYLKEVKEMFQD
QRDKYDHFLEVMKDFKAQRIDTEGVIARVKELFKGHNNLIYGFNTFLPKGYEITLDDEEP
PPKKAVEFDEAINFVNKIKKRFHNDEQVYKSFLDILNMYRKEHKNISEVYDEVSQLFEDH
PDLLEEFTRFLPDNSSSATVHHSQHIRSSLPRFDERSSAVPSRQMHLDKQRLRKETKDRV
GPSYLEHDHSVERPDLDEDRGAIKSHKDQRKRDKDNRERRNRDLDDREPEHDNNRDFNSQ
RLPDKRKPARKVEGFGANSLLASSDDKAGMKSMHPEAFSFIEKVKEKLANEDDHQAFLKC
LHIYTTEIITRNELQSLVADLLGKHPDLMEGFNEFLERSENHLEGYVAGVLGKKSLLSDG
HLPRQVRVDEKDKGPKRELDPAKEKPNREYTSKSIQELDLSNCERCTPSYRLLPDDYPIP
TASQRSEIGAQVLNDYWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS
TAKRVEDLLNNVNSNMISSDGPIRIEDYFTPLNLRCIERLYGDHGLDVMDILRKNQALAL
PVVLTRLKQKQEEWTKCRTDFNKVWADIYARNHYKSLDHRSFYFKQQDSKNLSAKALIAE
IKDIKENMQNEDCMLLAVAAGNKRPLVPHFDFEYHDSDVHEDLYKLIKFSCEEVLTTKEQ
LSKVMRLWTTFLEPILGVTSRTHVAEGVEDVKFRQRPTRNGAVSEMLGSPATDAATVKPR
QMKLNVISEENSLADAAKCSRTNGDATARELSFCESDAVGKEGSSFDAQPKTLNDVSAAD
RVSERLFSSSASPQSGAESRHGRSNTELPSGSQSIILKPDNGDEDSQGPKSSFDAIQARS
MATDATAATLVNGNFTQGSKVNQRLEESTGQPNVEKEEGELSPNGDIDEDNSAAYGEAGT
QTGQVKRNTDNQNPQVGNGEDAGVENDADADDEDSENASEAGDDMSVSESAGDECSREEH
EEEEDVEHDEIEGKAESEGEAEVHYSGGDASPLPLSERFLLSVKPLAKHVSLVSRDIEKK
DSRVFYGNDNFYVLLRLHRTLYERLFAAKTNSETKWRNSKDSSPSDPYASFMTALYYLLD
GSSDNSKFEDDCRAILGNQSYVLFTLDKLIYKLVKQLQAVATDEMDNKLLQLYEYEKSRK
PGKFVDSVYHENARVLLHEDNIYRFEFSSSPARLSIQLMDNGNEKPEMVAVSLEPNFAAY
LYNDFLSVVSSRKESQGIMLQRNKKKYTGLDEYLATSKAMEGIQLFNGLECKIACSSSKI
SYVLDTEDFFFRAKNRRKKSQSDLCTRLNQARLNKFHKFLSEACR
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgaagagattacgagatgagagctttgctggctctcaatttaaacgaccttttggtgct
tctcgaggagaatcatatgggcaacctcagaacaatggtggaagtgggggcattggacag
aagttgacaacagatgacgcccttcaatatcttaaagaagtgaaagagatgtttcaagat
caaagagataaatatgaccacttccttgaggtcatgaaagattttaaggcacaaagaatt
gacaccgagggtgtcatagctcgggtaaaggaactattcaaggggcacaataacctgatt
tatggatttaatacttttcttcctaagggttatgagattaccttggatgatgaggagcct
ccgccaaaaaaagctgtggagtttgatgaggctataaattttgtcaacaagataaagaag
cgattccataatgatgagcaagtgtataaatctttccttgatatattgaatatgtatcgt
aaggagcataaaaacatcagtgaagtttatgatgaggtttcacaactttttgaagaccac
ccagatcttttagaagagtttactagattcttacctgataattcatcgtcagcaactgtt
caccattctcagcacattcgaagtagtttacctcgatttgatgaaagaagctctgctgtg
ccttcacgacagatgcatctggataagcagcgcttgcgtaaggaaactaaggatagagtt
ggcccttcctatctcgagcatgatcatagtgttgagcgccctgacttggatgaagataga
ggggcaataaaatcacacaaggatcagaggaagcgtgataaggataatcgtgaaaggagg
aatcgtgatctggatgatagagaacctgagcatgataacaatagggatttcaacagccaa
cgtcttcctgacaaaagaaagcctgcacgcaaagttgaaggttttggagcaaattccctt
ttggcatcttcagatgacaaagctggtatgaaaagcatgcatcctgaagcatttagtttt
attgagaaggtcaaggagaaactggctaatgaagatgatcatcaggcattcctgaagtgt
ttgcatatatatactacagaaataatcacccgaaatgaattgcaaagtttggttgctgat
ctgctggggaagcacccggatcttatggagggatttaatgaatttttggagcgttctgag
aatcatctagaaggatacgttgctggtgttttaggcaaaaagtctttattaagtgatgga
catttgccaagacaagttagggtggatgagaaagataaagggcccaagcgtgagttagat
ccagctaaagaaaaacctaatagggaatatacttctaagtcgatccaagaacttgatctt
tctaattgtgaacgctgcacaccaagctatcgacttttacctgatgattatccaatacca
actgcaagccaacgatcagaaatcggtgcacaggttttgaatgattattgggtttctgtg
acctcaggaagtgaggactactcctttaaacacatgcgcagaaaccaatatgaggaaagc
ctttttagatgtgaagatgacagatttgagttagacatgttgctggagtctgtgagctct
actgctaaacgtgtggaggatctactaaacaatgttaatagtaacatgatcagctcagat
ggtcctattcgtattgaggactactttacacctcttaatttgaggtgcatagagcgtctt
tatggtgaccatggtttggatgtgatggacatattgcgtaaaaatcaagctcttgcattg
cctgtagtattaactcgacttaagcagaaacaagaagagtggactaagtgtcgtacagac
tttaacaaggtttgggctgacatatatgccagaaaccactacaagtcacttgatcataga
agcttctatttcaagcagcaagattccaagaacttgagtgcaaaggccttgatcgcagaa
atcaaagacatcaaagagaatatgcaaaatgaggattgtatgcttttggcggttgctgct
ggaaacaaaaggccgttggtccctcattttgactttgagtatcatgatagtgacgttcat
gaagacttgtataaactaataaagttttcttgtgaggaggttttgacaaccaaagagcaa
ctaagcaaagtgatgaggctttggactaccttcttggagcccattcttggcgttacgtct
cggactcatgttgctgaaggtgttgaagatgttaaatttcggcaacggcctacaagaaat
ggtgctgtatcagaaatgcttgggagtcctgcaactgatgctgcaactgtgaagcctaga
cagatgaaattgaatgtaattagtgaagaaaactcacttgctgatgccgctaaatgttct
aggactaatggtgatgctacagcaagagagcttagtttttgtgaatcagatgcagtgggt
aaagaaggttcgtcatttgatgcccagccaaagacgttaaatgatgttagtgcagctgat
agagtatcagaacggttatttagttccagtgcatcacctcaaagtggtgcagaaagtcgc
catggtagaagcaatacagaactaccatcaggttctcaatcaatcatattgaagccagac
aatggtgatgaagattctcagggtcccaagagttcttttgatgctattcaagcacgatca
atggctacggatgctacagctgccacgttggtcaatggaaacttcacccaaggatctaaa
gtgaatcagcgccttgaagaatctactgggcaacccaatgttgaaaaagaagaaggcgaa
ttgtcaccaaatggtgatattgacgaagataactctgcggcatatggagaggcaggtaca
caaactgggcaagtaaaacgtaatacagacaaccagaatcctcaagttggcaatggcgag
gatgcaggggtagaaaatgatgcagatgctgatgacgaggacagtgaaaatgcatctgag
gctggtgatgatatgtctgtcagtgaatctgctggtgacgagtgctctagggaggaacat
gaagaagaggaagatgttgaacatgatgagattgaaggtaaggctgagagtgaaggtgaa
gctgaagtgcactattcaggtggtgatgcaagcccattgccattatctgaacgttttctg
ttgtcagtaaagcctcttgcgaaacatgtatctttggtttctcgagacattgagaagaaa
gattctagagttttttacggaaatgataatttttatgtcctacttaggctccatcgaaca
ttgtacgaaaggctatttgctgctaaaacaaactccgaaacaaaatggagaaattcgaaa
gattctagcccttcagatccatatgctagttttatgacagccctttactatctgcttgat
ggttcatctgataattcaaagttcgaggatgattgccgagctattcttggaaatcagtca
tatgtgttatttacattggacaaactgatatataaacttgtaaagcagcttcaagctgtt
gcaactgatgagatggacaataagcttctccaactgtatgagtatgaaaaatcacggaaa
cctggaaagtttgttgattcagtctatcatgaaaatgcacgtgttttactgcacgaagac
aatatttaccggtttgagttttcctcttcccctgctcgcttgtcaattcagctgatggac
aatggaaacgagaagcctgagatggttgcagtttctctagaacctaactttgcagcttat
ctgtacaatgattttctctcagttgtctccagtagaaaagaatcccaaggaattatgctg
cagaggaacaaaaagaagtatactggacttgatgaatatttggccacatcaaaagctatg
gagggcattcagttatttaatggcttggaatgtaaaatagcttgcagttcatccaagata
tcctatgttctggacacagaagatttctttttccgagcgaagaatagaaggaaaaaatcg
caatcagatttgtgtacaagactaaaccaggcaaggttaaacaaattccacaagttttta
tctgaagcatgccggtaa
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