Chenopodium album (lamb's quarters): 145593479
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Entry
145593479 CDS
T11950
Symbol
LOC145593479
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
145593479 (LOC145593479)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
calb04131
]
145593479 (LOC145593479)
Membrane trafficking [BR:
calb04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
145593479 (LOC145593479)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
145593479
NCBI-ProteinID:
XP_081505850
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All DBs
Position
19:complement(16092933..16100919)
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AA seq
199 aa
AA seq
DB search
MKITAIVVLKCGSSEENPIILANASDVSTFGFFQRSSVREFIVFVSRTVAKRTLPGQRQS
VQHEEYKVHAYNRGGLCALGFMDDPYPVRSAFSLLTQVLDEYQKAFGDSWKGVTSDSTQP
WSYLNEALAKYQDPAEADKLLKIQRELDETKIILHKTIDSVLERGERLDSLVEKSSDLSA
ASQMFYKQAKKTNSCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggcaattgtggttttgaaatgcgggtctagcgaagaaaacccgataata
ttagcaaatgcatctgatgtcagtacattcggattcttccagagatccagcgttcgtgaa
ttcatcgtcttcgtctctcgtaccgttgccaaacgcacccttcctggccaacgtcaatct
gttcaacatgaagaatacaaggtgcatgcttacaatagagggggcctttgtgcgctgggt
tttatggatgacccctacccagtccggagtgcattttcactgctaacccaggtgttagat
gaataccaaaaggcatttggtgactcatggaaaggagtaacttctgatagcacacaacca
tggtcttatttgaatgaggctttggccaagtaccaggacccagctgaagctgataagcta
ctgaagattcaaagggagctggatgaaactaagattattcttcataagacaattgatagt
gtcctagagcgtggtgaaaggctggatagcttggtagaaaagagttcagatcttagtgct
gcatcacagatgttctacaagcaagcaaagaagaccaactcatgctgtacaatattatga
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