Chenopodium album (lamb's quarters): 145593651
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Entry
145593651 CDS
T11950
Symbol
LOC145593651
Name
(RefSeq) uncharacterized protein LOC145593651 isoform X1
KO
K12874
intron-binding protein aquarius
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145593651 (LOC145593651)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
calb03041
]
145593651 (LOC145593651)
Spliceosome [BR:
calb03041
]
Complex B
Other components
Prp19-related factors
145593651 (LOC145593651)
Complex C
145593651 (LOC145593651)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
ResIII
UvrD-helicase
AAA_22
UvrD_C_2
SLFN-g3_helicase
AAA
Parvo_NS1
AAA_16
Reticulon
Motif
Other DBs
NCBI-GeneID:
145593651
NCBI-ProteinID:
XP_081506067
LinkDB
All DBs
Position
19:39239307..39252147
Genome browser
AA seq
1545 aa
AA seq
DB search
MTKVYGTGTYDFKRHRVAEYPVEITHQIAVEKTPDSIPISNAPNSISLSEINRDPLTKIA
ADNWIKSGVNDSNPRKPFDAELVNDIYRKELLVKSGRKPVPLQRVMILEISQYLENYLWP
YFDSETASFEHVMSMILMINEKFRENVAAWVCFHDRKDVFKAFLERVLRLKEQGEHFTIA
EKTNYLVFMINVFQSLEDEVVSDTALRLASLQCWHSLSYGRFQMELCLNPDLIKKWKKMT
KAEAKKAKKRGENYDPSKSLEATFLRSLIVEFLGVLDSEVFFSTQHDDSERISTNGLREV
NDACVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSELYTHVRGKLFSQLVD
LLQFYETFEINDHEGTQLTDDEVVQAHYDRFQSFQLLAFKKIPKLRELALANVGAIHKRV
DLSKKLSVLSPNELKDLVCSKLKLISNNDPWSDRVDFLIEIMVSFFEKQKSQKEAINALP
LYPNEQIMWDESLVPNINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDI
QEAVPHLLAYINNEGETAFRGWSRMAVPIREFRISEVKQPNIGEVKPAAVTAKVTYSISS
YRSHIRSEWDGLKEHDVLFLLSIRPSFEPLSTEEASKATVPQRLGLHCVRGCEVIEIRDE
EGGLMNDFTGKIKRDEWKPPKGELRTVTVALDAAQYHMDVTDIAEKGAEDVYGTFNILMR
RKPKENNFKAILESIRDLMNETCIVPDWLHNIFLGYGNPSAAQWTNMPDLLETVDFKDTF
LDANHLKDSFSNYQISFVNPDGSENLHPEPPFQIKLPKTLKSNVQALPGNKSNITASRDG
DVNAIQERLVVETYIPPDPGPYPQDKPKQNTVRFTPTQVGAIISGVQPGLTMVVGPPGTG
KTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELAT
DLDFSRQGRVNAMLVRRLELLNEVERLARSLQLPEDVGYTCETAGFFWLLHVYSRWEQFL
AACSDNKDNPTFVQDRFPFKEFFSDAPQPIFTGKSFDRDMRAAKGCFRHLKTVFQELEEC
RAFELLKSTVDRANYLMTKQAKIVAMTCTHAALKRKDFLQIGFKYDNLLMEESAQILEIE
TFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYI
ELNAQGRARPSIAKLYNWRYRELGDLPYVKEETIFNRANAGFSYDYQLVDVPDYNGKGES
APSPWFYQNEGEAEYIVSVYIYMRLLGYPANKISILTTYNGQKFLIRDVISRRCVPYDII
GPPNKVTTVDKFQGQQNDFILLSLVRSRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFE
QCYELQPTFQRLLQRPDHLALNLTENMPFTDRHVEDTGPAYLVSGVEEMANIVNYKRHQV
DQARMMSLQYNSVNFEQGDLSVGEPIQNGQEDLTSVNDMETEGSVLENGKSEQVPPGNNS
KESTEMEEDKIGQNGDVQIENPEVRVTENAVTDGDADLAASNMEE
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagtatatggaactgggacttacgatttcaaacgccatagagtggcggaatac
ccagttgaaattacccatcaaattgctgttgaaaaaacccctgattcaatcccaatttca
aatgcccccaattcaattagtctttctgaaattaatcgagacccgcttactaaaattgct
gctgataattggatcaaatctggggtaaatgattccaaccccagaaaaccctttgatgct
gagcttgtcaatgatatttatcgcaaggagttgctcgtgaaatcgggccgaaaaccggtg
ccgttgcaaagggttatgattttggagattagtcagtatttggagaattatctttggccg
tattttgattctgaaactgctagttttgagcatgttatgtctatgatactcatgattaat
gagaagttcagagagaatgtggcagcttgggtgtgttttcatgacaggaaagatgtgttc
aaggcattcctggagcgggttcttcggcttaaggaacagggggaacactttaccattgcg
gagaagaccaactacttggttttcatgattaatgtctttcagagtttggaggatgaagtt
gtcagtgatactgctttaagactggcaagtctgcaatgctggcatagcttgtcatatggc
cgttttcagatggagctttgtctgaaccctgatttgataaagaaatggaaaaagatgact
aaggcagaagccaagaaagctaagaagcggggagaaaattatgatccatcaaaatctctg
gaagcaacattcttgagaagtctcatcgtggagttcttgggggtattggattctgaggtg
tttttctccacacagcatgatgattcagaaagaattagtacaaatggtttacgagaagtt
aatgatgcttgtgtcttgtactgtgagaggtttatggagttccttattgatttactaagc
caactgccaacaaggagatacttgaggcctttggtggctgatgttgcagttgttgccaaa
tgtcacttgagtgaactttatactcatgtaagaggaaagctgttttcacaactggttgac
ttgttacaattctatgaaacatttgagatcaatgatcacgaagggactcaactgactgat
gatgaggtcgttcaagcacactatgatcgctttcaatcctttcaattgcttgcttttaag
aaaattcccaagttgcgggagctggctttagcgaatgttggtgcaatacacaagcgagtt
gatctttcaaagaaactttctgttctttcgcctaatgagctcaaagacctagtgtgctct
aagctcaaactcatttcaaacaatgatccatggtcagacagggttgattttttaattgaa
attatggtatccttttttgagaaacaaaagtctcagaaggaagccataaatgctctccca
ctctacccaaatgagcaaattatgtgggatgaaagtcttgtacctaacattaactactct
ggagaaggatgcctggctctccctaaacttaatttgcagtttttgacccttcatgattat
ttgttgagaaattttaatctttttcgcttggagtctacatatgaaattcgggaggatatt
caggaagctgtgccgcaccttcttgcctatatcaataatgaaggggaaacagctttccgt
ggttggtcaagaatggccgtacccattagggaatttaggattagtgaggtgaagcaacct
aacattggggaagtaaaaccagcagcagttactgcaaaagttacttacagcatttccagt
tatagatcacacataagatctgaatgggatggattaaaagagcatgatgttttatttttg
ctttctatacgcccttcatttgagccattgagcacagaggaagcatctaaggcaactgtt
cctcaacggcttgggcttcattgtgtacgtggatgtgaagtgatagagatccgggatgag
gaaggaggtctgatgaatgattttactggaaaaataaaacgtgacgagtggaaacctcct
aagggtgaattgagaactgtaactgttgcactagacgcagcacaataccacatggatgtc
acagatattgcagagaaaggagctgaagatgtctatggaacttttaacattttaatgcgg
agaaaaccgaaggaaaataatttcaaggccattttagaatctattagagatcttatgaat
gaaacgtgtattgttcctgattggttgcacaacatatttttgggttatgggaatccttca
gctgctcagtggactaacatgcctgatcttttggagactgtagattttaaggatactttt
ctggatgccaatcatttgaaggacagtttttcaaattatcagatttcttttgttaatcct
gatggttcagagaacttgcatccggagcctccatttcaaattaaacttccaaagacgctg
aaaagcaatgttcaagctctccctggcaacaaatctaatataactgcctccagggatggt
gatgtcaatgcaattcaagaaaggctcgttgttgagacatatattcctcctgatccaggt
ccatacccccaagacaagccaaaacagaacacagttagatttacccctactcaggttggg
gcaattatctctggtgttcagccaggcttgactatggtagtaggtccacctggtactgga
aagactgatacagctgtgcagatcctaaatgttctatatcacaattgtccttcccagaga
actttaattataacacactccaatcaggctctgaatgatctttttgaaaagataatggag
agagatgtgcccgctcgttatcttcttcgattaggacaaggtgaacaggaattagcaact
gatctggacttcagtcgtcaaggtcgtgttaatgcaatgcttgtgcgacgtttggaactg
cttaatgaggtggagaggttagcgcgatctcttcagcttcctgaagatgtaggctacact
tgtgaaacagctgggttcttttggctgcttcatgtctactcacgttgggagcaatttcta
gctgcctgttctgataataaagataatccaacatttgttcaggaccgcttcccatttaaa
gagtttttttctgatgcccctcagccaatctttactggaaaatccttcgatagagatatg
cgggctgccaaaggatgttttcgccatctcaaaaccgtgtttcaggagcttgaagagtgt
agagcatttgaattgctgaaatcaactgtggatagagctaactacctaatgactaagcag
gcaaaaattgttgctatgacttgcacgcatgcagctctcaagagaaaggatttccttcag
attggattcaaatatgacaacctattgatggaagaaagtgcacaaatcctggaaattgaa
acttttattccaatgttgctgcagagacaggaagatggttatgcacgtcttaaacgttgc
atattaattggtgatcatcaccagctgcctccagttgtaaaaaacatggcctttcagaag
tatagccacatggatcaaagtctttttactcgttttgttcgtctaggcattccctatatt
gagcttaatgctcagggtcgagcacgaccaagcatagctaaactttacaactggaggtat
agagagctgggagaccttccctatgtcaaggaagaaactatttttaatagagcaaatgct
gggttttcttatgattatcagttagtagatgtgccggattataatggcaaaggtgaaagt
gctccttcaccctggttctatcagaatgagggagaggctgaatacattgttagtgtttac
atatacatgcgcctgttgggttatcctgcaaataagatatccatcttaactacttataat
ggccaaaaattcctcattcgtgatgttataagcagaagatgcgttccatacgacattatt
ggccccccaaacaaggtcacaacagtggataagtttcaaggtcagcagaatgattttatc
ttattgtcgctggtgcgcagtcgatttgtgggtcacttgcgcgatgtgagaagattggtt
gttgcaatgtctcgtgcaagacttggcctctatgttttctgccgccgttcattgtttgag
cagtgctatgaactacaacctactttccagcgtcttctacagagacctgatcaccttgct
ttaaacttgacagagaacatgcctttcacagatcgtcatgttgaggacacaggtccagcc
tatcttgtcagtggtgtggaagagatggctaatattgtgaactacaaaagacatcaggtt
gaccaggcaaggatgatgagcctccaatataattcagttaattttgaacaaggagatctg
tctgtgggagaacccatccagaatggacaggaagacctgacctcagtgaatgacatggag
acagaaggatctgtcttggaaaacggcaaatcagagcaagtcccgcctggaaataactct
aaggaaagtacagaaatggaagaagataagattggtcaaaatggagatgtgcaaatagag
aatcctgaggttcgtgtaacagaaaacgctgtaacagatggtgatgctgatcttgctgcc
tccaatatggaggagtaa
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integrated database retrieval system
