KEGG   Chenopodium album (lamb's quarters): 145598605
Entry
145598605         CDS       T11950                                 
Symbol
LOC145598605
Name
(RefSeq) small ribosomal subunit protein RACK1-like
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
calb  Chenopodium album (lamb's quarters)
Pathway
calb03010  Ribosome
Brite
KEGG Orthology (KO) [BR:calb00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    145598605 (LOC145598605)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:calb03019]
    145598605 (LOC145598605)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:calb04147]
    145598605 (LOC145598605)
Messenger RNA biogenesis [BR:calb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     145598605 (LOC145598605)
Exosome [BR:calb04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   145598605 (LOC145598605)
  Exosomal proteins of colorectal cancer cells
   145598605 (LOC145598605)
  Exosomal proteins of bladder cancer cells
   145598605 (LOC145598605)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 DSE1_N Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_Aladin TRM82_WD CFAP251_N Beta-prop_WDR41 Beta-prop_RIG_2nd ASA1 Beta-prop_HPS5 Beta-prop_DCAF12 PAC11 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st PROPPIN WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N WD_LRWD1 eIF2A Cytochrom_D1 Tricorn_2nd Beta-prop_NUP159_NUP214 WD40_like Beta-prop_pof12 DUF1416 ATP_bind_3
Other DBs
NCBI-GeneID: 145598605
NCBI-ProteinID: XP_081511109
LinkDB
Position
2:55896383..55898755
AA seq 327 aa
MGEQLQLRGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIILWKITKEDKVYGVPSRRLT
GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGTTARRFVGHTKDVLSVAFSIDNRQI
VSASRDRTIKLWNTLGECKYTIQDGDGHSDWVSCVRFSPNTLQPTIVSSSWDKTVKIWNL
TNCKLRATLAGHSGYVNTVAVSPDGSLCASGGKDSTILLWDLAEGKRLYSLDAGTIIHAL
CFSPNRYWLCAATEGGIKIWDLESKSVVEDLKVDLKTEAEHDVEGAGTTASKKKVIYCTS
LSWSADGQTLFSGYTDGVIRVYGIARY
NT seq 984 nt   +upstreamnt  +downstreamnt
atgggagagcagctacaactccgtggcaccatgcgtgctcacaccgacatggtcaccgcc
atcgcaaccccaatcgacaacagcgacatgattgtcactgcttcaagggacaaatccatc
atcctctggaaaatcactaaggaggacaaggtctatggtgttcctagtcgccgtcttact
ggacattctcactttgttgaggatgttgtactttcttctgatggtcagttcgctctttct
ggcagttgggatggtgagcttcgtctttgggaccttgctgctggtaccactgctcgtcgc
tttgttggtcacaccaaggatgtgctttccgtcgctttctcgattgataatcgtcagatt
gtttctgcttctagggatcgtaccatcaagctttggaacactcttggtgagtgcaagtac
acaatccaagatggtgatggtcactcagactgggttagctgtgtgaggttcagccctaac
actttgcagccaaccattgtctcatcctcatgggataagaccgtcaagatttggaatttg
accaactgcaagttgagggcaaccttggctggtcacagtggttatgtgaacactgttgct
gtatcccctgatggttccttgtgcgctagtggtggcaaagacagtaccattttgttgtgg
gatttggccgagggcaagaggctttactctcttgatgctggtactattatccatgccctt
tgctttagccctaacaggtattggctctgtgctgctactgagggtggtattaagatttgg
gatttggagagcaagagtgttgttgaggacttgaaggttgaccttaagaccgaagccgaa
catgatgttgagggtgcaggcaccactgcatctaagaagaaggttatttactgcactagt
ttgagctggagcgctgatggccaaacactgttcagtggatacacagatggtgttattaga
gtttatggaatcgcccgttactag

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