Chenopodium album (lamb's quarters): 145599365
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Entry
145599365 CDS
T11950
Symbol
LOC145599365
Name
(RefSeq) cyclin-dependent kinase D-1-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03022
Basal transcription factors
calb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
145599365 (LOC145599365)
09124 Replication and repair
03420 Nucleotide excision repair
145599365 (LOC145599365)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
calb01001
]
145599365 (LOC145599365)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
calb03021
]
145599365 (LOC145599365)
03019 Messenger RNA biogenesis [BR:
calb03019
]
145599365 (LOC145599365)
03400 DNA repair and recombination proteins [BR:
calb03400
]
145599365 (LOC145599365)
Enzymes [BR:
calb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
145599365 (LOC145599365)
2.7.11.23 [RNA-polymerase]-subunit kinase
145599365 (LOC145599365)
Protein kinases [BR:
calb01001
]
Serine/threonine kinases: CMGC group
CDK family
145599365 (LOC145599365)
Transcription machinery [BR:
calb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
145599365 (LOC145599365)
Messenger RNA biogenesis [BR:
calb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
145599365 (LOC145599365)
DNA repair and recombination proteins [BR:
calb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
145599365 (LOC145599365)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Kinase-like
OAM_alpha
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
145599365
NCBI-ProteinID:
XP_081511885
LinkDB
All DBs
Position
2:63547868..63568304
Genome browser
AA seq
420 aa
AA seq
DB search
MSDLDSLITKKVADRYFKREVLGEGTYGVVYKAIDTQTNQTVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPNIIALIDAFPHKGNLHLVFEFMESDLEAVIRDRNIVLSPADTKSYLQ
MTLKALAFCHKKWVLHRDMKPNNLLLAADGQLKLGDFGLARIFGSPDRRFTHQVFARWYR
APELLFGTKQYGPAVDVWGAACVFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKPAQWPD
MVYLPDYVEYQYVPAPPLRTLFPMASDDALDLLSKMFAYDPKARISAQQALEHRYFTSPP
AATNPASLPRPSHKGDNNAKVPESNPNEGPTVLSPPRKMRRVMPNRNDGGEENVHNAEKL
DDHVSGSRLTTGPSSSRTDTIPMSIDFSVFGSRPPPRPTINSADRTHLKRKLDLEFQMPE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttggatagtttgattacaaagaaagttgctgatcgctactttaagcgtgaa
gttcttggtgaaggtacctatggtgttgtctacaaggccatcgatacccagacaaatcaa
actgttgcaatcaagaaaattcgtcttggaaagcagaaggaaggtgtaaatttcactgcc
ctgagagaaattaaactgttaaaagagcttaaagatcctaacataatagcgttgatagat
gccttcccccataagggaaacttgcatcttgtgtttgagttcatggagagtgatcttgaa
gctgtcattcgggataggaatattgtactctctcctgctgacacaaaatcttatctacaa
atgaccttgaaagcactagctttttgtcacaagaagtgggtccttcacagggatatgaag
ccaaacaacctgttgttagcagctgatggacagctcaaacttggggattttggtttagca
cgtatatttggcagtccagatcgcaggtttacccatcaagtttttgctagatggtataga
gcacctgagctgctatttggcactaagcaatatggtcctgcagtggatgtctggggtgct
gcttgtgtgtttgcagaactactattgagaagaccttttttacagggttcaagtgacatt
gatcaacttggcaaaatttttgcagcctttgggacaccaaagcctgctcagtggcctgat
atggtataccttcctgattatgtagaataccaatatgtgccggcacctcctttacgtaca
ttgttcccaatggcaagtgatgatgctttggacttgttgtctaagatgttcgcttacgat
ccaaaagctcgaatttccgcgcagcaggccttggagcacagatactttacatcaccacca
gctgctacaaatccagcttctttaccacgaccttcacataaaggcgataataacgcaaaa
gttcctgagtctaatccaaatgaaggacctactgtgttgtctccacctagaaaaatgaga
agagtaatgcccaatagaaatgatgggggtgaagaaaatgttcacaacgctgaaaagtta
gatgatcatgtcagtgggagtagattaacaactggcccaagctcaagcagaactgataca
ataccaatgtcaatagatttttctgtgtttggatctagacctcctcctagaccaactatt
aacagtgctgataggacacatctaaagcgcaaattagatcttgaattccagatgcctgaa
taa
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