Chenopodium album (lamb's quarters): 145601993
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Entry
145601993 CDS
T11950
Symbol
LOC145601993
Name
(RefSeq) tRNase Z TRZ1-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
calb Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calb03016
]
145601993 (LOC145601993)
Enzymes [BR:
calb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
145601993 (LOC145601993)
Transfer RNA biogenesis [BR:
calb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
145601993 (LOC145601993)
Prokaryotic type
145601993 (LOC145601993)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
145601993
NCBI-ProteinID:
XP_081514230
LinkDB
All DBs
Position
2:complement(79135031..79140450)
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AA seq
298 aa
AA seq
DB search
MSMVPKNDETNLEANSATKKKKRGINIQGYQIEGLSIAGQETCIIVPSLNLAFDIGRCPQ
RAISQDFLFISHGHMDHIGGLPMYVATRGLFSMKPPTIFVPKAIKEDVERLFDVHRAMDQ
SELKNNLVGLDVGEEFYIRRDLKVKAFKTYHVIPSQGYVIYSVKHKLKQDYIGLPGHEIK
ALKDKGVEITTATTSPEIAFTGDTTADFIVDPANVDVLRAKILVMECTFLDKAVDVVHAR
DYGHTHLDEVVKYAEKFLNKAILLIHFSARYYVEEIEDAISRLPSAFAGRIFALTEGI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggtgccgaagaatgacgagacgaacttggaagcaaactcagcaacaaagaag
aagaaaaggggaataaatatacaaggctatcaaattgagggtttatcaattgctggtcaa
gaaacatgcataatcgtcccttctctcaacctcgctttcgatatcggaaggtgccctcaa
cgcgccatttctcaagacttcctttttatctcccatggtcatatggaccacattggagga
ttaccgatgtatgttgcgactcgtggattgttctctatgaaacctcctacgatttttgtg
cctaaagctataaaagaggatgtggaaaggctttttgatgtacacagagcaatggaccaa
tctgagctgaagaataatttagttggtctagacgtgggagaagaattctatattaggagg
gatctcaaagtaaaagcatttaagacatatcatgtcattcccagtcagggatatgtaatt
tattccgttaagcacaagcttaagcaggattacattggtcttcctggacatgagatcaag
gctttgaaggataaaggtgtggagattaccacagcaactacgtcacctgagatagcattt
actggagacacaacagctgacttcattgttgatccagctaatgttgatgtgctgagggca
aagattcttgtgatggagtgcaccttcttagacaaagcagttgacgtggtgcatgcaaga
gattatggacatacacatctggatgaggttgtaaagtatgctgaaaagtttctgaataag
gcaattcttctgatccacttttctgctagatactatgtagaggaaattgaagatgccatt
tcgagattgccatcagcttttgccggccggatctttgcactcactgaagggatttaa
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