Chenopodium album (lamb's quarters): 145604538
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Entry
145604538 CDS
T11950
Symbol
LOC145604538
Name
(RefSeq) serine--tRNA ligase-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
145604538 (LOC145604538)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
calb01007
]
145604538 (LOC145604538)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calb03016
]
145604538 (LOC145604538)
Enzymes [BR:
calb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
145604538 (LOC145604538)
Amino acid related enzymes [BR:
calb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
145604538 (LOC145604538)
Transfer RNA biogenesis [BR:
calb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
145604538 (LOC145604538)
Prokaryotic type
145604538 (LOC145604538)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
YabA
HAUS5
HDA2-3
Spc24
DUF7040
Med9
DUF4349
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
145604538
NCBI-ProteinID:
XP_081516554
LinkDB
All DBs
Position
2:complement(84501022..84505146)
Genome browser
AA seq
447 aa
AA seq
DB search
MLDINLFRVDKGGNPEIIRESQRRRFADVAIVDEIIALDQEWRRRQFELESLRKDFNRIN
KEVARLKIKGEDASEMIKSTDENKKSTAEKDAEVQEVKAALYAKLELIGNLIHDSVPVSN
DEANNAVIRTWGERRMEPKLKNHVDLVELLGIVDTKKGSNVAGARGFYLKGDGVLLNQAL
INFGLSFLSSKGYTPLMTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAFHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITSPNGND
SWDMHEEMLKNSEEFYQQLGLPYQIVAIVSGALNDAAAKKLDLEAWFPSSNQYRELVSCS
NCTDFQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTLCCILENYQKEDGVEIPEVL
RPFMYGKTFLPFQSKPAPEAKGKKSKA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatcaatctgtttcgagtagataaaggaggaaaccctgaaatcattcgcgaa
tctcaacgtcgtcgtttcgcagatgtagccattgtcgacgagattatcgccctcgatcaa
gaatggcgccgacgtcaatttgagctcgagagcttgcgcaaggacttcaataggatcaac
aaagaggtggcacgcctgaaaattaaaggtgaggatgcatctgaaatgatcaaaagcaca
gacgagaataagaaatcaactgcagagaaagatgctgaagttcaggaagttaaggctgca
ttgtatgctaaattggaattgattgggaatctgattcacgattcagtcccagttagcaac
gatgaggcgaacaatgctgtgatccgaacatggggtgaaaggcgaatggaaccaaagttg
aaaaatcatgttgaccttgttgagcttcttgggatagtggatacgaagaaaggctccaac
gttgctggtgctagaggtttttacttgaaaggtgatggcgtccttctgaatcaagctctg
ataaattttggtctcagtttcctctcatcaaagggatatacaccgttaatgactccattc
ttcatgcggaaagatatcatggcaaaatgtgctcagttagcccaatttgacgaagaactt
tacaaggtaactggtgagggagatgacaaatatttgattgccactgctgagcagccactt
tgtgctttccacttggatgattggattcatccctcacaactcccaataagatatgctgga
tactcatcgtgcttccggaaagaagcaggttcacatgggcgagatactcttggaattttc
cgagttcatcagtttgagaaaattgaacaattttgcatcactagcccgaatggaaatgat
tcatgggatatgcacgaggaaatgttgaaaaattctgaagaattttatcagcagctggga
cttccttatcagattgtggctattgtttctggtgccctgaatgatgcagcagcaaagaag
cttgatttggaagcttggtttccttcatctaatcaatatagagagttggtgtcatgttca
aactgtacagacttccagtcaaggagattggagattcgatatggccagaaaaagagcaat
gaacaaacaaagcaatatgtccatctgttgaattcaactctgacagcaactgaaagaacc
ttgtgctgtattctggagaactaccagaaggaagacggagtcgaaatacccgaagtttta
agaccattcatgtatggaaagaccttcttgcctttccagagcaaacccgccccagaagca
aagggaaagaagtctaaagcttaa
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