Chenopodium album (lamb's quarters): 145611737
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Entry
145611737 CDS
T11950
Symbol
LOC145611737
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03013
Nucleocytoplasmic transport
calb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145611737 (LOC145611737)
09122 Translation
03013 Nucleocytoplasmic transport
145611737 (LOC145611737)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
calb03019
]
145611737 (LOC145611737)
03041 Spliceosome [BR:
calb03041
]
145611737 (LOC145611737)
Messenger RNA biogenesis [BR:
calb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
145611737 (LOC145611737)
Spliceosome [BR:
calb03041
]
Complex C
Other components
EJC/TREX
145611737 (LOC145611737)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
145611737 (LOC145611737)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
DSE1_N
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_EML
WD40_RFWD3
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
TRM82_WD
Beta-prop_IFT140_1st
PAC11
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR41
Beta-prop_Nup120_160
WD_LRWD1
PROPPIN
Beta-prop_WDR11_1st
DUF7099
Motif
Other DBs
NCBI-GeneID:
145611737
NCBI-ProteinID:
XP_081523221
LinkDB
All DBs
Position
24:10051491..10061474
Genome browser
AA seq
319 aa
AA seq
DB search
MAQQKAEDATHPFKNLYSREYQGHKKKVHSVAWNCIGTKLASGSVDQTARVWHIEPTSHG
KVKDIEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDARSGKCSQQTELSGENINIT
YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV
LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
VRTISFNHTGEYIASASEDLFIDIASIETGRSIHQIPCRAAMNSVEWNPKSNLLAYAGDD
KNKYQADEGVFRIFGFQSA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagaaagcggaggatgcaacacacccttttaagaatctctacagtagagaa
tatcagggtcacaaaaagaaggtgcattcagtggcttggaattgtattggaactaagctt
gcttcgggttcagttgatcaaacagctcgagtttggcacattgaacctactagtcatgga
aaggtaaaggatattgaatttaaggggcacactgatagtgtggaccagctctgttgggat
cccaaacacgcagatctacttgcaactgcatcaggggataaaacagttcgtttgtgggat
gctcgcagtggaaaatgctcacagcaaacagagcttagtggtgaaaatattaacattaca
tataaacctgatggggcacacatagctgttggaaacagggatgatgaattaacaattcta
gatgttagaaaatttaagccaattcacagacgcaagttcaattatgaggtaaatgagatt
gcatgggacatgactggagagaagttctttctgacaactggaaatggtactgttgaagtc
cttgcatacccctctttgaaagcacttgacacccttacggctcacactgctggttgctat
tgtattgcaattgatccactaggaagatattttgctgttggaagtgctgactcattggtc
agtctttgggatattaaagagatgctatgtgttcgaacatttgtaaaactcgagtggcct
gtccgaacaataagttttaatcacactggagagtatattgcttcagccagtgaagattta
ttcattgacatagcaagtattgaaactggacgatctatccatcaaataccttgtcgagcg
gcaatgaatagtgttgaatggaatccaaaatcaaacttacttgcatatgctggagatgat
aaaaacaaataccaagccgatgaaggtgttttccgcatatttgggttccagagtgcttag
DBGET
integrated database retrieval system