Chenopodium album (lamb's quarters): 145613530
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Entry
145613530 CDS
T11950
Symbol
LOC145613530
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
145613530 (LOC145613530)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
calb03021
]
145613530 (LOC145613530)
03036 Chromosome and associated proteins [BR:
calb03036
]
145613530 (LOC145613530)
Transcription machinery [BR:
calb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
145613530 (LOC145613530)
Coactivators
SAGA/TFTC/STAGA complex
145613530 (LOC145613530)
Chromosome and associated proteins [BR:
calb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
145613530 (LOC145613530)
STAGA complex
145613530 (LOC145613530)
TFTC complex
145613530 (LOC145613530)
SAGA complex
145613530 (LOC145613530)
SLIK complex
145613530 (LOC145613530)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
145613530
NCBI-ProteinID:
XP_081524776
LinkDB
All DBs
Position
25:complement(6384397..6392273)
Genome browser
AA seq
672 aa
AA seq
DB search
MDVELIDKTVLEYLQKKGFKQTEIAFQEEQQQQQQQSKNSSSNSHTDLDVAKLILTFTSE
SESLPAQYHDGYSKLRSWAHNSLDLYKHELLRVLYPVFIHCFMDLVARGHLQEARNFFIT
FREDHETMHQRDLQKLEGVLSPSHLEEMEFAHTLRQSKVNIKICQYSYELLLQYLHNTRS
ITMLGVINEHINFQVCPGQPGSISDDADAVTLVDGGQDAANLINQKEILWGMLEDSIEDR
LEKGGGLLLDSEKVDGENKEGENEENKVKKSADGGKQGASVKKSKKDKVGGTGKTARPEA
NTPMAPRVKPELPLPAIPIEVEHSILEDLRNRVQLSSVALPSVSFYTFMNTHNSLNCASI
SHDGSLVAGGFSDSSLKVWDMSQLGQQTSTSALQGEKDAAGNEQMLGTNGVKRPYTLFQG
HSGPVYSASFSPLGDFILSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPYGHYFA
SCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHVNCNYIATGSSDKTVRLWDIQSGEC
VRIFIGHRSMILSLAMSPDGRYMASGDEDGAIMMWDLASGRCITPLVGHTSCVWSLAFSG
EGSLLASGSADCTVKLWDINASTKTLRSEEKTGSSNRLRSLRTLPTKSTPVYSLMFSRRN
LLFGAGVLSKRS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagaattgatagacaaaacagtgttggagtatttgcagaagaaaggtttcaag
caaactgaaatcgcttttcaagaagaacaacaacagcagcagcaacaatcgaagaattct
tcgtcgaattctcatactgacctagatgtggctaagctcattctaacctttacttccgag
tcagagagccttcctgcacaatatcatgatgggtacagtaagcttagatcatgggctcac
aattccctagatttatacaagcatgaattgcttcgagtgctttatccagtatttatccat
tgtttcatggatcttgttgcaaggggccatctacaagaagcccgtaatttcttcattacc
ttccgcgaagatcatgaaactatgcatcagagagatctgcagaagctcgaaggagttcta
tcaccctctcatttggaggagatggagtttgcccacactttaaggcagagcaaagtaaac
atcaagatctgtcagtactcgtacgagcttctcctccagtatctgcataacactcggtct
attacaatgcttggagttataaatgagcatatcaacttccaagtttgccctggtcagcct
ggttcaatatcagatgacgctgacgcggtgactctggttgatggtggccaagatgcagca
aatttaataaatcaaaaagaaatcctgtgggggatgctggaagattcgatagaagatcgc
ttggagaagggtggaggtttgctcttagactctgaaaaggtagatggggaaaacaaggaa
ggggagaatgaagaaaataaggtaaaaaaatctgctgacggaggaaagcaaggtgcatca
gtaaaaaagtccaaaaaagataaagttggaggcactggaaaaactgctcgtccagaagcc
aacactcctatggcaccaagagtcaaaccagagcttcctttgcctgcaataccaattgaa
gttgaacattctatcctggaagaccttcgtaatcgtgtgcagttgagtagtgtggccctg
ccatctgtaagcttctacacatttatgaatacacacaatagtttaaactgtgcatcaatt
tcacatgatggatccttggttgctggtggattttccgactcttctttaaaggtctgggac
atgtcacagcttgggcaacaaacgagcacttctgctctacagggtgaaaaagatgcagct
ggaaatgaacaaatgcttggtacaaatggtgttaaaagaccctatactttgtttcagggt
cattctgggcctgtttattctgcttcatttagcccccttggggattttatactctcttct
tcagcagattcaactgtgcggctttggagcacaaaactaaatgccaatcttgtttgctac
aagggtcataattatcctgtatgggatgtgcagttcagcccctatggtcactattttgct
agctgttctcatgatagaacggcaaggatctggtccatggacagaatacaacctctaaga
atcatggctgggcatttatcagatgttgattgtgtccggtggcatgtaaactgtaattac
atagctactggatctagtgataaaacagttcgattatgggacattcagagtggggagtgt
gtcaggatatttattggtcacaggagtatgatattgtccttggcaatgtcacctgatggt
cggtatatggcatctggtgatgaagacggtgcaatcatgatgtgggatcttgctagtgga
cgttgcattacccctttggtgggtcacacatcatgcgtatggtcacttgctttcagtggt
gaaggctcacttcttgcctccggatcagctgactgcacagttaaactgtgggatatcaat
gcaagcacaaagacattgagatctgaggaaaaaactgggagttcaaacagacttcggtcg
ttgaggactcttcctaccaaatcaacaccagtttactctctgatgttttcaagaaggaat
ctgctatttggtgctggggttctttctaaacgttcatga
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