Chenopodium album (lamb's quarters): 145614159
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Entry
145614159 CDS
T11950
Symbol
LOC145614159
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a-like
KO
K11087
small nuclear ribonucleoprotein D1
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145614159 (LOC145614159)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
calb03041
]
145614159 (LOC145614159)
03032 DNA replication proteins [BR:
calb03032
]
145614159 (LOC145614159)
Spliceosome [BR:
calb03041
]
Complex A
U1 snRNP components
Sm proteins
145614159 (LOC145614159)
U2 snRNP components
145614159 (LOC145614159)
Complex B
U1 snRNP components
145614159 (LOC145614159)
U4/U6.U5 tri-snRNP components
145614159 (LOC145614159)
Complex C
U2 snRNP components
145614159 (LOC145614159)
DNA replication proteins [BR:
calb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
145614159 (LOC145614159)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
EBNA2_Core
Gemin7
SM-ATX
Motif
Other DBs
NCBI-GeneID:
145614159
NCBI-ProteinID:
XP_081525293
LinkDB
All DBs
Position
3:57360747..57366558
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTPKGKNPVTMDHLSV
RGNNIRYYILPDSLNLETLLVEEAPRVKPKKAAAGRPVGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaaattgaacaatgaaacggtttccattgagctcaag
aatggcactgtagttcatggaactatcacaggtgttgatattagcatgaacacacattta
aagactgtcaaactcacacccaaggggaaaaacccagtaactatggatcacttgagtgtt
cgtgggaacaacattcgatattacattcttcctgacagcttgaaccttgaaaccctactt
gtggaggaggctccaagagtcaagcctaagaaggcagctgctgggagacctgtggggcgt
ggaagaggcagaggccgtggtcgtggaaggggccgtggtcgttag
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