Chenopodium album (lamb's quarters): 145616452
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Entry
145616452 CDS
T11950
Symbol
LOC145616452
Name
(RefSeq) TATA-box-binding protein-like isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
145616452 (LOC145616452)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
calb03000
]
145616452 (LOC145616452)
03021 Transcription machinery [BR:
calb03021
]
145616452 (LOC145616452)
Transcription factors [BR:
calb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
145616452 (LOC145616452)
Transcription machinery [BR:
calb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
145616452 (LOC145616452)
RNA polymerase III system
TFIIIB
145616452 (LOC145616452)
RNA polymerase I system
SL1/TIF-1B
145616452 (LOC145616452)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
GST_C_4
Motif
Other DBs
NCBI-GeneID:
145616452
NCBI-ProteinID:
XP_081527295
LinkDB
All DBs
Position
26:3964422..3967959
Genome browser
AA seq
200 aa
AA seq
DB search
MEEQGLEGGQPVDQSRHPSGIIPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAV
IMRIREPKTTALVFASGKMVCTGAKSEADSKLAARKYARIIQKLGFPATFKNFRIQNIVA
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFKKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcagggcttggaaggtggtcaacctgtagatcagtcgagacatccatctggg
atcatccctactctgcagaacattgtatcaaccgtcaacttggactgcaagttggaactg
aaatctattgcactgcaagctcgtaatgcagagtataatccaaagcgttttgcggctgtc
attatgaggataagggagccaaagacaacagccctagtatttgcttctggaaagatggtt
tgcaccggagctaagagtgaggcagactcaaaactagctgctcgtaagtatgctcgaatt
attcagaagctgggattccctgccacattcaagaatttcagaatccagaacatagtggca
tcgtgtgatgtaaaatttcctatcagactggaggggcttgcatactctcatggtgccttt
tctagttatgaaccagaactatttcctggcttgatctatcgaatgaaacaaccaaagatt
gtgctgcttatattcgtctcaggaaagatagttctgacaggagctaaggtgagagaagag
acttacactgcctttgagaacatatatccagtgcttaccgagtttaagaaaaaccagcag
tga
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integrated database retrieval system
