Chenopodium album (lamb's quarters): 145617439
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Entry
145617439 CDS
T11950
Symbol
LOC145617439
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
calb Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
calb04131
]
145617439 (LOC145617439)
Membrane trafficking [BR:
calb04131
]
Autophagy
Other autophagy associated proteins
Others
145617439 (LOC145617439)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_IFT140_2nd
Beta-prop_Vps41
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
CFAP251_N
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_RSE1_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_IFT80_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
145617439
NCBI-ProteinID:
XP_081528269
LinkDB
All DBs
Position
26:complement(13108454..13115417)
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AA seq
446 aa
AA seq
DB search
MATVSAWPNNPNPNPNSSPSSPNSFLAVDPNLPPPPSSPPTSMSEQSDHLYFDSNPEESD
SLSPPSSLPPIRTSLSENPNPNPNSPNSLSSSQPLALLHVSFNQDYGCFSSGTDRGFRIY
NCDPFREIFRRDFDRGGGIGKVEMLYRCNILALVGGGAEPQYPVNKVMIWDDHQSRCIGE
LSFRSEVRGVRLRRDRIVVVLEQKVFVYNFADLKLLHQIETSANPKGLCEVSQSAGKLVL
VCPGLRKGQIRVEHYASRKTKFIMAHDSRIACFSLTQDGGLLATASSKGTLVRIFNTFDG
TLLQEVRRGADRAEIYSLAFSTTAQWLAVSSDKGTVHVFSLKVNSGSPVNENPNPAPESN
AAGAPAGSSLSFIKGVLPRYFNSEWSVAQFRLLEGNQYIVAFGHQKNTVVILGMDGSFYR
CKFDPAKGGEMTQLEYNNFLKPEEPF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtttcagcttggccaaacaatccaaaccctaaccctaattcttcaccttct
tccccaaattcattcctcgcagttgatccaaacctcccacctccaccttcatcaccgccg
acttccatgtcggagcaatctgatcacctctacttcgattccaatcccgaagaatctgat
tctctctctcctccttcttctcttcccccaattcgaacttctttatcggaaaaccctaac
cctaatcccaattcccctaattcgctttcatcttctcaacctcttgctcttcttcacgtt
tcgtttaatcaagattatgggtgtttttcatctgggactgatcgagggtttcgaatctat
aattgtgatccttttagggaaatttttcgaagggattttgatcgaggtgggggtattggg
aaggtggaaatgttgtatcgatgtaatattcttgcgttagtaggtggaggagctgaacct
cagtaccctgttaataaggttatgatttgggatgatcatcagagcaggtgtattggggaa
ttgtcgtttcggtctgaagttcgcggtgttcggcttcggcgtgatcgaattgtggtggtt
ttggagcagaaggtgtttgtttataattttgctgatttgaagttgttgcatcagattgaa
actagtgctaatccgaaggggttgtgtgaggtttcgcaatcggccgggaagttggtgtta
gtctgtcctggattgaggaaggggcaaattcgggttgagcattatgcttctagaaagact
aagtttattatggctcatgattctaggattgcttgcttttccttgactcaagatggaggt
cttttggctactgcgagctcgaaggggacgcttgttaggatctttaacacttttgatggt
acattgcttcaggaggtaagaagaggtgcagatagagcagagatatacagcttggccttc
tctacaactgctcagtggttagctgtttcaagtgacaagggtactgtgcatgtcttcagc
ttgaaagttaattctggttctccagtcaatgaaaatccaaatcctgctcccgaaagcaat
gctgctggtgcacctgctggctcatctctttcttttattaaaggagtattgcctaggtat
ttcaattcagaatggtcagttgctcaatttcgtttacttgaagggaatcagtatatcgtt
gcatttgggcatcagaagaatacagtggtaattcttggcatggatggcagcttctatcgt
tgcaagtttgatcctgcaaagggtggagagatgacccaactggaatataacaactttctg
aagccagaggaacccttctaa
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